| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,336,497 | C→T | 8.6% | intergenic (‑41/+39) | PP_2052 ← / ← PP_5500 | bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,336,497 | 0 | C | T | 8.6% | 259.8 / 11.7 | 93 | intergenic (‑41/+39) | PP_2052/PP_5500 | bifunctional sugar‑phosphatase/mannitol‑1‑phosphate 5‑dehydrogenase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (42/43); new base T (6/2); total (48/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.83e-01 | |||||||||||
AGAGAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTGCGGC > NC_002947/2336350‑2336637 | agagAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGTATGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGc < 1:45448/149‑1 (MQ=255)agagAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGc > 5:297330/1‑148 (MQ=255) agaAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAAc < 8:175111/149‑1 (MQ=255) aGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAgg < 3:280452/149‑1 (MQ=255) gcttgcttGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGc < 5:98179/149‑1 (MQ=255) gcttgcttGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGc > 2:190682/1‑149 (MQ=255) gcttgcttGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGc < 8:233534/149‑1 (MQ=255) gcttgcttGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGc < 2:264311/149‑1 (MQ=255) cttgAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGTTGCAGGCgagat < 3:316507/149‑2 (MQ=255) ttgAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAAc > 2:157944/1‑149 (MQ=255) ttgAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAAc > 5:85118/1‑149 (MQ=255) gAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAAc < 6:297330/147‑1 (MQ=255) aGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgt < 6:251571/149‑1 (MQ=255) gtgtCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtg > 4:381/1‑149 (MQ=255) tgtCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTTCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgt > 1:141702/1‑149 (MQ=255) tgtCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgt > 3:224863/1‑149 (MQ=255) gtCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgag > 7:102880/1‑147 (MQ=255) tCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgtgt < 3:381/149‑1 (MQ=255) tCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgtgt < 7:111961/149‑1 (MQ=255) cTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgtgt > 3:292835/1‑147 (MQ=255) cTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGtgtgtg < 5:139102/148‑1 (MQ=255) cTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAAAAGGCGAGAACGgtgtgt > 1:262613/1‑147 (MQ=255) tGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgtgt < 6:239238/146‑1 (MQ=255) tGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgtgt > 5:239238/1‑146 (MQ=255) tGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAg > 7:81660/1‑149 (MQ=255) gcgcAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGc < 1:190682/149‑1 (MQ=255) gcAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAg < 3:271960/149‑1 (MQ=255) gcgcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTggg < 1:129582/149‑1 (MQ=255) gcgcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTggg < 3:127821/149‑1 (MQ=255) gcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGc > 6:280001/1‑121 (MQ=255) gcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGc < 5:280001/121‑1 (MQ=255) gcTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTggggg < 1:176670/149‑1 (MQ=255) ggTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCa < 1:18134/147‑1 (MQ=255) tgtCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAACGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCa < 2:149472/149‑1 (MQ=255) tCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgt < 6:32794/124‑1 (MQ=255) tCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGgtgt > 5:32794/1‑124 (MQ=255) gAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGTTGCAGGCgaga < 8:103021/115‑1 (MQ=255) gAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGTTGCAGGCgaga > 7:103021/1‑115 (MQ=255) aaGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGa < 4:13869/125‑1 (MQ=255) aaGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGa > 3:13869/1‑125 (MQ=255) gggTGCCATCCATATCGAAGATGGCGCTGAAAAGCTGTTTACCGTGAAAGAAAAGCATTGGCTAT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCggggg < 7:306381/149‑1 (MQ=255) gCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGcaca > 8:38767/1‑149 (MQ=255) catccatATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCga > 7:266737/1‑102 (MQ=255) catccatATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCga < 8:266737/102‑1 (MQ=255) atccatATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCggggg < 7:283955/142‑1 (MQ=255) atccatATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCggggg > 8:283955/1‑142 (MQ=255) tccatATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGtt < 4:292835/149‑1 (MQ=255) ccatATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTc < 1:157944/149‑1 (MQ=255) catATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTc < 2:262613/148‑1 (MQ=255) atatCGAAGATGGCGCTGAAAATCTGTTTACCGTTAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCgggg > 2:160890/1‑137 (MQ=255) atatCGAAGATGGCGCTGAAAATCTGTTTACCGTTAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCgggg < 1:160890/137‑1 (MQ=255) gAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAgg < 7:141440/148‑1 (MQ=255) gAACATGGCGCTTAAAATCTCTTTACCCTCAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCGGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAggg < 2:322405/149‑1 (MQ=255) aaGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTc > 3:5574/1‑141 (MQ=255) aaGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAgggg > 1:226243/1‑149 (MQ=255) ataTGTCGGTGAAAATCTGTTTACCGTGATAGTAAAGCATTTGCTGT‑TGCCCCTTGTCGTTGCGTGAGGCATCTCGGCTGCAACAGGCGTGAACGGTTTGTTAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCGCACGTTCTACAggggg < 2:141702/147‑1 (MQ=255) cgcTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCATGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCt > 5:114674/1‑148 (MQ=255) cTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCggg < 8:13524/121‑1 (MQ=255) cTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCggg > 7:13524/1‑121 (MQ=255) cTGAAAATCTGTTTACCGTAAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAg > 3:282260/1‑149 (MQ=255) aaTCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAggg > 4:190872/1‑134 (MQ=255) aaTCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAggg < 3:190872/134‑1 (MQ=255) tGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATATCGACTGCAAAAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCTGGTGCACACGTTCGACAGGGGGACGATCAGGAGTGACg > 5:100092/1‑148 (MQ=255) cccGTGACCGACACGCATTGGCTGT‑CGCCCCTGGTCGGTGCGGCAGGCATCGCCCCTGCCACACCCGAGAACGGTGTGTGCGCTGCTCGGGCGGCAGTCAGGGCGGCGCCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCagag < 6:18417/147‑1 (MQ=255) aCCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGAc < 3:83124/142‑1 (MQ=255) aCCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGAc > 4:83124/1‑142 (MQ=255) cGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGc < 2:278514/81‑1 (MQ=255) cGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGc > 1:278514/1‑81 (MQ=255) gTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGt > 7:106139/1‑147 (MQ=255) gaaagaaaAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGTCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGcac < 4:185859/107‑1 (MQ=255) gaaagaaaAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGCGGcac > 3:185859/1‑107 (MQ=255) aagaaaAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGCCGCAGAGGTAAggcg > 3:232397/1‑149 (MQ=255) agaaaAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAgg > 2:120882/1‑116 (MQ=255) agaaaAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAgg < 1:120882/116‑1 (MQ=255) aaaGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAggcggggc > 1:311765/1‑149 (MQ=255) aaGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGcac > 3:33699/1‑100 (MQ=255) aaGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGcac < 4:33699/100‑1 (MQ=255) aaGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGAGGCTCAGGAGTGACGCAGAGGTAAggcggggcg > 4:49342/1‑149 (MQ=255) gCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTggg < 8:9618/72‑1 (MQ=255) gCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTggg > 7:9618/1‑72 (MQ=255) gCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCgggg > 2:283183/1‑88 (MQ=255) gCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCgggg < 1:283183/88‑1 (MQ=255) ccccTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTg > 4:114259/1‑146 (MQ=255) ccccTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTg < 3:114259/146‑1 (MQ=255) cccTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCa > 1:133777/1‑147 (MQ=255) tCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAgagga > 1:118664/1‑138 (MQ=255) accgttctcGCCTGTTGCAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGt > 5:222697/6‑149 (MQ=255) ggCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCagag > 6:73782/1‑103 (MQ=255) ggCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCagag < 5:73782/103‑1 (MQ=255) gCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGTGGGGCGTGCAGAGGAGGTTGGCAACCGTTg > 2:255643/1‑149 (MQ=255) gCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTg > 1:209714/1‑149 (MQ=255) gttctcGCCTGTTGCAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTgc > 5:40008/3‑149 (MQ=255) gttctcGCCTGTTGCAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTgc > 1:118408/3‑149 (MQ=255) ttctcGCCTGTTGCAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGTGACGGGCAGGAGGGACGCAAAGGGAAGGCGGGGGGGCGGGGGGCGTGCAGGGGAGTTTGGGAAGCggtccg > 4:176176/2‑144 (MQ=255) ctcGCCTGTTGCAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTgcggc > 2:151161/1‑149 (MQ=255) | AGAGAAGCTTGCTTGAGTGTCCTGAAGCGCAGGCGCTCGGTGTCGAAGAGGGTGCCATCCATATCGAAGATGGCGCTGAAAATCTGTTTACCGTGAAAGAAAAGCATTGGCTGT‑TGCCCCTTGTCGTTGCGTCAGGCATCTCGCCTGCAACAGGCGAGAACGGTGTGTGAGCTGCAGTGGGGGCAGTCAGGTCGGGGGCACACGTTCGACAGGGGGACGCTCAGGAGTGACGCAGAGGTAAGGCGGGGCGGAGCGGGGCGTGCAGAGGAGGTTGGCAACCGTTGCGGC > NC_002947/2336350‑2336637 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |