| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,369,768 | G→C | 10.2% | L862L (CTG→CTC) ‡ | gdhB → | NAD‑specific glutamate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,369,768 | 0 | G | C | 10.2% | 317.4 / 23.9 | 108 | L862L (CTG→CTC) ‡ | gdhB | NAD‑specific glutamate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (53/44); new base C (7/4); total (60/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.87e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
GTTGCCCGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCATGACGATGACGACCC > NC_002947/2369622‑2369911 | gTTGCCCGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTggg < 1:158188/149‑1 (MQ=255) ttGCCCGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGggc < 4:65767/149‑1 (MQ=255) ttGCCCGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGggc < 4:104137/149‑1 (MQ=255) gCCCGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGggcgg > 5:272538/1‑149 (MQ=255) cccGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGggcgg > 3:217780/1‑148 (MQ=255) cccGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGggcgg > 2:195391/1‑148 (MQ=255) ccGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGggcgg > 1:222925/1‑147 (MQ=255) cGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCCCAGCGGCAg < 7:268335/149‑1 (MQ=255) gtggtgGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCCCAGCGGCAgg < 8:272404/149‑2 (MQ=255) ggCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGa < 4:217780/149‑1 (MQ=255) gcgcTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGAc > 5:71972/1‑145 (MQ=255) gcTGGTCCGACCGCGAAGAGGACTTCCGTACCGCAGGGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGGCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATc < 7:142923/149‑1 (MQ=255) tGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCCCAGCGGCAg > 1:300001/1‑134 (MQ=255) tGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCCCAGCGGCAg < 2:300001/134‑1 (MQ=255) tCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATcgccgc > 5:264007/1‑149 (MQ=255) gACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGa < 4:142110/134‑1 (MQ=255) gACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGa > 3:142110/1‑134 (MQ=255) gACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGccgccg > 8:263889/1‑148 (MQ=255) cgcgAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAgg > 2:196586/1‑149 (MQ=255) cgcgAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAgg > 6:8393/1‑149 (MQ=255) aaGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAggcgtg < 1:195391/149‑1 (MQ=255) gagGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAggcgtggc > 6:247062/1‑149 (MQ=255) cTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGc > 8:273608/1‑148 (MQ=255) ttCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTa > 2:181119/1‑149 (MQ=255) ttCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCATACTTAAA‑AAAAAGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTa > 4:149601/1‑149 (MQ=255) ccGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAggcgtgg < 3:226218/140‑1 (MQ=255) ccGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACga < 1:150070/115‑1 (MQ=255) ccGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACga > 2:150070/1‑115 (MQ=255) cGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCt < 5:91767/149‑1 (MQ=255) gAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCtt < 6:272538/149‑1 (MQ=255) gCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGCGCAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGCCGGCAGCCCTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGc > 1:247209/1‑149 (MQ=255) ggTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTATCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTccctggtct > 1:118709/1‑142 (MQ=255) gTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCt > 2:266943/1‑149 (MQ=255) gTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGCGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCt > 4:28294/1‑149 (MQ=255) tGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCGGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCTCTGGGCGGCAGCCGTGACCACATCGCCGCCGAAGGCGTCGCGTGCTACCGCATATTC‑‑‑ATTTACGGCATGCTc > 1:195901/1‑149 (MQ=255) aaaGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGa < 1:196586/149‑1 (MQ=255) aaGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGAc < 5:8393/149‑1 (MQ=255) aaGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGAc < 5:176330/149‑1 (MQ=255) gCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACa > 7:117461/1‑148 (MQ=255) cccAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACAt > 6:64028/1‑148 (MQ=255) cccAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACAt > 6:68749/1‑148 (MQ=255) ccAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTc > 2:65673/1‑142 (MQ=255) cagcagGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTc < 8:106975/141‑1 (MQ=255) cagcagGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTc > 7:106975/1‑141 (MQ=255) cagcagGTGAAGAACTCGGGCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCAc < 4:168113/149‑1 (MQ=255) agcagGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCAcc > 3:148417/1‑149 (MQ=255) agcagGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCAcc > 2:96319/1‑149 (MQ=255) cagGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGa < 6:71972/149‑1 (MQ=255) agGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGCGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGAc < 3:28294/149‑1 (MQ=255) tGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAAc < 4:148417/149‑1 (MQ=255) agaaCTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTc < 6:293833/149‑1 (MQ=255) aaCTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCaa < 2:222925/149‑1 (MQ=255) aCTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCaa < 4:142190/148‑1 (MQ=255) aCTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAg < 7:176318/149‑1 (MQ=255) tCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCATCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGa > 4:194200/1‑149 (MQ=255) ggTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACg < 1:48383/149‑1 (MQ=255) aTCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGGTAACGGATCTTC‑‑‑ATTTACGGCCTGCTCGACCTAACCGACAACCAGAAGGCCGGttg > 6:208942/1‑147 (MQ=255) aTCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTgg > 3:102794/1‑149 (MQ=255) aTCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTg < 7:273608/148‑1 (MQ=255) tCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGc > 7:146392/1‑149 (MQ=255) cGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCg > 6:91639/1‑149 (MQ=255) gTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGCGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCgt < 3:66283/149‑1 (MQ=255) ggTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTgc > 3:56330/1‑149 (MQ=255) gTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCgg > 4:248563/1‑104 (MQ=255) gTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCgg < 3:248563/104‑1 (MQ=255) tCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTgccg > 3:278828/1‑149 (MQ=255) gcgc‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGGCGCTGTGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGGCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGccgccg < 2:118709/149‑1 (MQ=255) cgc‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCgg < 7:111335/149‑1 (MQ=255) gc‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTa > 6:110400/1‑80 (MQ=255) gc‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTa < 5:110400/80‑1 (MQ=255) gc‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGc < 1:96319/149‑1 (MQ=255) c‑cAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGc > 7:64633/1‑148 (MQ=255) cAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGcc > 6:112420/1‑148 (MQ=255) ggtggtTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGt > 4:74895/1‑42 (MQ=255) gtggtTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACATCCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACgtg < 3:149601/149‑1 (MQ=255) gtTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACgtggtg > 6:21961/1‑149 (MQ=255) tttCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGc < 3:262788/149‑1 (MQ=255) ccTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGt < 1:175817/148‑1 (MQ=255) ccTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGt > 2:175817/1‑148 (MQ=255) cTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACgtggt < 4:175824/143‑1 (MQ=255) cTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACgtggt > 3:175824/1‑143 (MQ=255) gCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCat > 7:51817/1‑148 (MQ=255) ccGCGTCGCCTGCGGCTGGGCGGCAGCCGTGACGAGATCTCCGCCGAAGTCGTGGCGTGCTACCGCATCTTCCTTTTTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTc < 1:266943/148‑1 (MQ=255) ccGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatg > 5:32503/1‑148 (MQ=255) ccGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatg < 6:32503/148‑1 (MQ=255) gTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgat < 4:223254/149‑1 (MQ=255) acggcTGCCGCCCAGCGGCAGGCGTGACGAGATCGCCGCCGCAGGCGTGGCGGGCGCCCGCATCGGC‑‑‑CTTTCCGGCCTGCTCGACATCCCCGCCACCCGCAAGGCCGGTGGCGGGGTGCCGCCGGCCCCCGTGGTGCGGCatgacgatg > 3:47887/5‑149 (MQ=255) acggcTGCCGCCCAGCGGCAGGCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgat > 4:291763/5‑148 (MQ=255) acggcTGCCGCCCAGCGGCAGGCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgat > 3:121359/5‑148 (MQ=255) acggcTGCCGCCCAGCGGCAGGCGGGCCGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACCTCCCCGACACCCGCACGGACGGTGGCGTGGTGCCGCCGGCCCACGTGGTGAGTCatgacgatg > 3:43630/5‑149 (MQ=255) acggcTGCCGCCCAGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgat > 6:250059/5‑148 (MQ=255) cggcTGCCGCCCAGCGGCAGGCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgatga < 3:291763/146‑1 (MQ=255) ggcTGCCGCCCAGCGGCAGGCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgatgac > 2:25983/3‑149 (MQ=255) ccTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgatgac > 4:321011/1‑148 (MQ=255) ccTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgatga > 3:68449/1‑147 (MQ=255) ccTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCatgacgatga < 4:68449/147‑1 (MQ=255) cTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCAtgacgatgacga > 5:85169/1‑149 (MQ=255) cTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCAtgacgatgacga > 3:111872/1‑149 (MQ=255) ccGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCATGACGATGACGcccc > 4:16751/1‑149 (MQ=255) ccGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCATGACGATGACGAccc < 3:194200/149‑1 (MQ=255) | GTTGCCCGTGGTGGCCTGCGCTGGTCCGACCGCGAAGAGGACTTCCGTACCGAAGTGCTGGGGCTGGTGAAAGCCCAGCAGGTGAAGAACTCGGTCATCGTGCCGGTCGGCGC‑CAAGGGTGGTTTCCTGCCGCGTCGCCTGCCGCTGGGCGGCAGCCGTGACGAGATCGCCGCCGAAGGCGTGGCGTGCTACCGCATCTTC‑‑‑ATTTCCGGCCTGCTCGACATCACCGACAACCTCAAGGACGGTGGCGTGGTGCCGCCGGCCAACGTGGTGCGTCATGACGATGACGACCC > NC_002947/2369622‑2369911 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |