| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,442,668 | G→T | 6.7% | P602P (CCG→CCT) | topA → | DNA topoisomerase I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,442,668 | 0 | G | T | 6.7% | 330.1 / 11.0 | 105 | P602P (CCG→CCT) | topA | DNA topoisomerase I |
| Reads supporting (aligned to +/- strand): ref base G (47/51); new base T (3/4); total (50/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-02 | |||||||||||
Only 100 of 107 total aligned reads displayed.
AAGAGAACCTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGG > NC_002947/2442520‑2442816 | aaGAGAACCTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCg > 5:60121/1‑149 (MQ=255) agagAACCTCGACGACGTCGCCCATGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGt < 5:295113/149‑1 (MQ=255) agagAACCTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGt < 2:215596/149‑1 (MQ=255) gagaACCTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTg > 7:68723/1‑149 (MQ=255) agaACCTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGc < 6:274648/149‑1 (MQ=255) agaACCTCGACGACGTCGCCCAGGGCGAGCGTGACTAGAATTACGTGCTCGACTAGTTCTACGGCGATTTAAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGc < 8:64673/149‑1 (MQ=255) gaACCTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGc > 4:245295/1‑148 (MQ=255) aCCTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACAGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCaa < 3:230124/148‑1 (MQ=255) ccTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAgg < 2:180274/149‑1 (MQ=255) ccTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAg > 5:266494/1‑148 (MQ=255) ccTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAg > 8:253646/1‑148 (MQ=255) cTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAgg > 1:166466/1‑148 (MQ=255) tCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAggca > 4:234550/1‑147 (MQ=255) tCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAg > 1:218820/1‑146 (MQ=255) tCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAg < 2:218820/146‑1 (MQ=255) acgacgTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCTTGCACGGAAtgt < 6:209348/149‑1 (MQ=255) acgacgTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAAtgt > 7:252500/1‑149 (MQ=255) acgacgTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCACCCGACCATGACCAACATTCCGTGCAAGGAAtgt > 7:214220/1‑149 (MQ=255) gacgTCGCCCAGGGCGAGTGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTgg > 7:266879/1‑149 (MQ=255) gacgTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACC‑ACATTCCTTGCACGGAAtgttgg < 7:42793/149‑4 (MQ=255) gTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGGCg > 1:99768/1‑149 (MQ=255) gCCCAGGGCGAGCGTTACTGTAAGAACGTGCTCTACGAGTTCTACGGCGATTGCAGCAAAAAGCTGCAGACTGCCGACTCCAGCGAAGACGGAATGCGTGCCAACCAGCCGACCATGACGAACATTCCGTGCAAGGAATGTGGTCGGc < 3:109126/148‑1 (MQ=255) gCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGcc > 8:137039/1‑149 (MQ=255) ccAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCga > 8:193937/1‑149 (MQ=255) cAGGGCGAGTGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCgat < 8:266879/149‑1 (MQ=255) aGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCgat > 3:292412/1‑148 (MQ=255) cGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCgatgatga < 1:330685/149‑1 (MQ=255) aCTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCAcc < 4:292412/149‑1 (MQ=255) tGGAAGAACGTGCTCGTCGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCAGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGc > 7:287616/1‑149 (MQ=255) tGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGc > 5:242503/1‑149 (MQ=255) tGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGc > 5:296519/1‑149 (MQ=255) tGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGc > 1:97651/1‑149 (MQ=255) gaagaaCGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAAtgt < 1:213452/121‑1 (MQ=255) gaagaaCGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAAtgt > 2:213452/1‑121 (MQ=255) gaagaaCGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCt < 7:193937/148‑1 (MQ=255) gaagaaCGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCt > 8:152047/1‑148 (MQ=255) aCGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACg > 5:326826/1‑149 (MQ=255) gTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACggg < 6:9360/149‑1 (MQ=255) tGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGgt < 7:152047/149‑1 (MQ=255) acgaTTTCTACGGAGATTTAAGCAAAAAGGTGGATTCTGACGAGTCCAGCGAAGACGTCATGCTTGCGAACCAGCCGACGATTAACAACATTCCGTGCAAGGAATGTGGTCGGGCGATGATGATTCGCTCCGCTTTTAATGGTGTGTTc < 6:58964/149‑1 (MQ=255) ttCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGgt > 4:173185/1‑138 (MQ=255) ttCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGgt < 3:173185/138‑1 (MQ=255) tACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTAc < 3:85517/131‑1 (MQ=255) tACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTAc > 4:85517/1‑131 (MQ=255) tACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTg > 7:12787/1‑149 (MQ=255) cGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGtt < 6:60121/146‑1 (MQ=255) tgCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCTAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCTTGCACGGAAtgt < 5:274183/95‑1 (MQ=255) ggCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCgatga > 1:315702/1‑109 (MQ=255) ggCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCgatga < 2:315702/109‑1 (MQ=255) ggCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGctc > 3:115450/1‑149 (MQ=255) ggCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGAAAGCGTGCCAACCCGCCGACCATGACCAACATTCCTTGCACGGAAtgt > 6:274183/1‑96 (MQ=255) gCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGctct > 7:5362/1‑149 (MQ=255) aTTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGc < 7:253646/149‑1 (MQ=255) tCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTa < 3:245295/148‑1 (MQ=255) cAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACa > 3:8278/1‑149 (MQ=255) aGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAg > 2:230373/1‑149 (MQ=255) aGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAg > 1:329636/1‑149 (MQ=255) gCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGc > 2:147858/1‑149 (MQ=255) cAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGcc < 8:68723/149‑1 (MQ=255) aaaaaGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCt < 2:329636/149‑1 (MQ=255) aaaGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTgc > 7:199828/1‑149 (MQ=255) gCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGccgccg > 8:64119/1‑148 (MQ=255) cAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGa < 6:266494/148‑1 (MQ=255) aGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGaaa < 2:166466/149‑1 (MQ=255) tGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGctct > 4:218509/1‑124 (MQ=255) tGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGctct < 3:218509/124‑1 (MQ=255) tGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTg < 2:90449/125‑1 (MQ=255) tGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTg > 1:90449/1‑125 (MQ=255) ccGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAgc < 1:147858/147‑1 (MQ=255) tCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCaa < 1:230373/149‑1 (MQ=255) tCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCaa < 8:252500/149‑1 (MQ=255) ccAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCaa < 6:296519/148‑1 (MQ=255) cAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAgg > 8:63434/1‑149 (MQ=255) cAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACAATCCGTGCAAGGAATGTGGTCGGCCGATGATGAATCGCACCGCTTCTTCGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAgg < 4:91384/149‑1 (MQ=255) aGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCTTGCACGGAAtgt < 3:23083/60‑1 (MQ=39) aGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGTAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGgt < 1:128667/96‑1 (MQ=255) aGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGTAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGgt > 2:128667/1‑96 (MQ=255) gCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCt > 8:292047/1‑149 (MQ=255) cGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTa < 6:326826/149‑1 (MQ=255) aaGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTTCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTAcc < 5:259970/149‑1 (MQ=255) aaGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCgatgatgat < 7:261494/73‑1 (MQ=255) aaGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCgatgatgat > 8:261494/1‑73 (MQ=255) ggCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCaa < 6:242503/149‑1 (MQ=255) cATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTg > 6:74547/1‑94 (MQ=255) cATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTg < 5:74547/94‑1 (MQ=255) aTGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCt < 4:8278/149‑1 (MQ=255) tGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTg < 8:5362/149‑1 (MQ=255) tGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTg < 7:90585/149‑1 (MQ=255) gCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGaaa > 8:190209/1‑117 (MQ=255) ccGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGcgacga < 3:61270/149‑1 (MQ=255) ccGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGcgacga < 2:97651/149‑1 (MQ=255) ccGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGcgac > 1:250482/1‑147 (MQ=255) ccGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGcgac > 1:304748/1‑147 (MQ=255) aCCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGAt < 7:292047/149‑1 (MQ=255) ccATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGAtt > 2:76612/1‑149 (MQ=255) cATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTgg < 4:16919/131‑1 (MQ=255) aTGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGc < 3:234550/149‑1 (MQ=255) aaCATTCCGTGCAAGGAATGTGCTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGAGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTCCCGCTga > 6:209136/1‑149 (MQ=255) aCATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTgac < 4:115450/149‑1 (MQ=255) gTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAgg < 7:63434/149‑1 (MQ=255) | AAGAGAACCTCGACGACGTCGCCCAGGGCGAGCGTGACTGGAAGAACGTGCTCGACGAGTTCTACGGCGATTTCAGCAAAAAGCTGCAGACTGCCGAGTCCAGCGAAGACGGCATGCGTGCCAACCAGCCGACCATGACCAACATTCCGTGCAAGGAATGTGGTCGGCCGATGATGATTCGCACCGCTTCTACGGGTGTGTTCCTGGGTTGCTCTGGCTACAGCCTGCCGCCGAAAGAGCGCTGCAAGGCTACCGTCAACCTGGTGCCGGGCGACGAGATTGCCGCTGACGACGAGG > NC_002947/2442520‑2442816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |