| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,444,424 | G→T | 11.8% | R156S (CGC→AGC) | sulA ← | cell division inhibitor SulA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,444,424 | 0 | G | T | 11.8% | 311.4 / 26.3 | 115 | R156S (CGC→AGC) | sulA | cell division inhibitor SulA |
| Reads supporting (aligned to +/- strand): ref base G (50/50); new base T (7/7); total (58/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.68e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
GCTCAGTGTGGGCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTGA > NC_002947/2444281‑2444569 | gCTCAGTGTGGGCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGt > 8:62645/1‑149 (MQ=255) tCAGTGTGGGCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGtt > 4:152180/1‑148 (MQ=255) aGTGTGGGCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCCGCCTCGGCTGATGTTCa < 5:154635/148‑1 (MQ=255) gtgtGGGCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCATCAGCGTATCAGGCTATTTGAAGTGACAGGGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAg < 1:50439/149‑1 (MQ=255) tgGGCGTGAAGATGGCCGGTCGCCTGATGTATGTAGAGCTAGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCtt > 4:148698/1‑149 (MQ=255) gCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTtgt < 4:290935/149‑1 (MQ=255) gCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTtgt < 8:46224/149‑1 (MQ=255) gCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTtgt < 6:171024/149‑1 (MQ=255) cAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCAt < 4:180839/148‑1 (MQ=255) gATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTc > 6:159177/1‑149 (MQ=255) gATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTc < 3:152180/149‑1 (MQ=255) tGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCg < 5:159177/149‑1 (MQ=255) ggCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCgg > 4:73238/1‑149 (MQ=255) gCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGc < 7:267881/149‑1 (MQ=255) ggcGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTTCAGCAGCGTATCAGTCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTg < 7:252305/147‑1 (MQ=255) gCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCt > 2:13243/1‑149 (MQ=255) cTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTg > 1:277013/1‑148 (MQ=255) tggatggCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCCAAGCCTGAACATCCGCCTCGGCTGATGTTCAg < 1:40913/118‑1 (MQ=38) tggatggCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCCGCCTCGGCTGATGTTCAg > 2:40913/1‑118 (MQ=39) gatggCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAg < 4:245289/149‑1 (MQ=255) atggCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGc < 3:73238/149‑1 (MQ=255) tggCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCa < 7:62645/149‑1 (MQ=255) gAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑Gc < 7:223186/119‑1 (MQ=255) gAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑Gc > 8:223186/1‑119 (MQ=255) tCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTgg > 8:50495/1‑149 (MQ=255) gAGCGTGTTGAAGTGCCGCGTGTGCTGCAGTGAGTGTGCAGCATCGTTTCAGGGTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GGTTTTCCGGCTCTGGGTGCACGTAGCAGTTGTTGGc < 5:93696/148‑1 (MQ=255) gAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCAGCACTGGCTGCACGTAGCAGTTGTTGGCg > 2:255231/1‑149 (MQ=255) gCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTg > 8:297023/1‑149 (MQ=255) tgatgaAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAg < 7:107345/149‑1 (MQ=255) gggCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCAtt < 7:108165/149‑1 (MQ=255) ccGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGAc > 3:89140/1‑149 (MQ=255) cgcgTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACg > 1:189279/1‑149 (MQ=255) gtgtGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGTGGCATTGACGTTg > 3:12893/1‑149 (MQ=255) gtgtGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTg < 3:148972/149‑1 (MQ=255) tgtgCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGTCGCATTTCCAGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTg < 1:255231/149‑1 (MQ=255) gctgcACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCCCGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGcc > 5:192495/1‑147 (MQ=255) cACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCccagc > 1:203714/1‑147 (MQ=255) aCTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCAtt < 6:186069/133‑1 (MQ=255) aCTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCAtt > 5:186069/1‑133 (MQ=255) tGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCt > 4:238459/1‑149 (MQ=255) tGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCt > 6:180659/1‑149 (MQ=255) gAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCt > 2:256912/1‑148 (MQ=255) gAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCt > 5:58543/1‑148 (MQ=255) gtgtGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTcac < 1:256912/149‑1 (MQ=255) tgtgCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTcac < 6:58543/148‑1 (MQ=255) tgtgCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCCGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTcacc > 8:246270/1‑149 (MQ=255) cagcagCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACgg > 5:73505/1‑149 (MQ=255) agcagcGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGgt > 4:307420/1‑149 (MQ=255) cagcGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGgtgt > 8:279144/1‑149 (MQ=255) agcGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGAc < 6:32290/122‑1 (MQ=255) agcGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGAc > 5:32290/1‑122 (MQ=255) agcGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGtgtg < 3:238459/149‑1 (MQ=255) tCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCATCCGAGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGa < 7:283761/148‑1 (MQ=255) aGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCTCAGCCAGCTCACCACGGTGTGGCTGAGGc > 5:223450/1‑149 (MQ=255) aGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAgg < 2:189279/148‑1 (MQ=255) aGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGc > 8:18319/1‑149 (MQ=255) ggCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGcc > 3:295304/1‑149 (MQ=255) gCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCCGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGccc > 6:13789/1‑149 (MQ=255) gCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGcc > 7:221063/1‑148 (MQ=255) tATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAg > 8:270681/1‑149 (MQ=255) tttGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAgg < 2:127021/148‑1 (MQ=255) tGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGTGGCATTGACGTTGCCCAGCCAGCTCACCACGGTTTGGCTGAGGCCCAGGTg < 4:12893/148‑1 (MQ=255) gAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAgtt > 4:251135/1‑83 (MQ=255) gAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAgtt < 3:251135/83‑1 (MQ=255) aaGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCaa < 3:148698/149‑1 (MQ=255) aGTGAGA‑GGCAAAGCCTGAACATCAGCCTAGGCGGATGTTCAGGCTTTGT‑GCATTTCCTGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGGATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCaa < 8:300200/148‑1 (MQ=255) tGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCAGCATTGACGTTGCCCAGCCAGCTCACCACGgtgt > 2:310863/1‑127 (MQ=255) tGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCAGCATTGACGTTGCCCAGCCAGCTCACCACGgtgt < 1:310863/127‑1 (MQ=255) aCA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCt > 2:316823/1‑149 (MQ=255) a‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTca < 4:20787/149‑1 (MQ=255) a‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTca > 3:112542/1‑149 (MQ=255) gCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTcaca < 6:66813/149‑1 (MQ=255) gCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTca > 5:231791/1‑147 (MQ=255) aaaGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAgg > 8:165378/1‑149 (MQ=255) aaaGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAgg > 7:41975/1‑149 (MQ=255) aaGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGc < 5:180659/149‑1 (MQ=255) aGCCCGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGcc < 7:246270/149‑1 (MQ=255) gCCTGAACATCAGCCGAGGCGGATGGTCAGGCTTTGT‑GCATTTCCGGCCCTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCa < 6:192495/149‑1 (MQ=255) ccTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTcaca < 6:87051/143‑1 (MQ=255) ccTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTcaca > 5:87051/1‑143 (MQ=255) ccTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAg > 4:102529/1‑149 (MQ=255) cTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGt < 6:146936/129‑1 (MQ=255) cTGAACATCCGCCTCGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGt > 5:146936/1‑129 (MQ=255) tGAACATCCGCCTCGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGa < 8:38672/86‑1 (MQ=37) tGAACATCCGCCTCGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGa > 7:38672/1‑86 (MQ=37) tGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACg < 3:126355/109‑1 (MQ=255) gAACATCCGCCTCGGCTGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCAAGGTGCAAAGCCTAACAGGCCAGTTg > 8:266974/1‑149 (MQ=255) gAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTg > 5:75462/1‑149 (MQ=255) aaCATCAGCCGAGTCCGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCAAGCTCACCACGGTGTGGATGAGGCCAAGGAGCAAAGCCACACAGGCCAGTTg > 8:194326/1‑148 (MQ=255) aaCATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAgg < 5:83417/119‑1 (MQ=255) aaCATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGtt < 2:277013/147‑1 (MQ=255) aCATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTg > 7:157179/1‑147 (MQ=255) aTCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAgc > 7:177848/1‑149 (MQ=255) aTCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAgc < 1:316823/149‑1 (MQ=255) gCCGAGGCGGATGTTCAGGCTTTGT‑GAATTTCCGGCACTGGCTGCCCGTAGGAGATGTTGGCGTGCAGCGGCATAGACGTTGCCCAGCCGCCTCACCACGGTCTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAgcgcgc > 4:203541/1‑149 (MQ=255) cGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCTCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCtt < 6:223450/149‑1 (MQ=255) cGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCtt < 7:165378/149‑1 (MQ=255) ggCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTGa < 6:231791/149‑1 (MQ=255) ggATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGa < 6:275338/102‑1 (MQ=255) ggATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGa > 5:275338/1‑102 (MQ=255) | GCTCAGTGTGGGCGTGCAGATGGCCGGTCGCCTGATGGATGGCGAGCTCGAGCGTGATGAAGGGCCGCGTGTGCTGCACTGAGTGTGCAGCAGCGTATCAGGCTATTTGAAGTGACA‑GGCAAAGCCTGAACATCAGCCGAGGCGGATGTTCAGGCTTTGT‑GCATTTCCGGCACTGGCTGCACGTAGCAGTTGTTGGCGTGCAGCGGCATTGACGTTGCCCAGCCAGCTCACCACGGTGTGGCTGAGGCCCAGGTGCAAAGCCTCACAGGCCAGTTGCAGCGCGCTTTGA > NC_002947/2444281‑2444569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |