| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,445,046 | C→A | 6.5% | E156* (GAA→TAA) ‡ | lexA‑I ← | transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,445,046 | 0 | C | A | 6.5% | 342.8 / 7.9 | 105 | E156* (GAA→TAA) ‡ | lexA‑I | transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base C (50/48); new base A (4/3); total (54/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 108 total aligned reads displayed.
CAGCGGCGAATGACGCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTGGAAGAAGG > NC_002947/2444904‑2445192 | cAGCGGCGAATGACGCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCAcc > 6:172038/1‑149 (MQ=255) aGCGGCGAATGACGCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCAcc > 3:207674/1‑148 (MQ=255) gcggcgAATGACGCCGCCGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGa > 3:7629/1‑149 (MQ=255) gcggcgAATGACGCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGa > 3:63705/1‑149 (MQ=255) gcggcgAATGACGCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACGAAGTCACCgt < 7:168582/149‑2 (MQ=255) gAATGACGCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATgcgc > 5:214744/1‑149 (MQ=255) gACGCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTc < 2:254328/132‑1 (MQ=255) gCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACaa > 2:88222/1‑149 (MQ=255) gCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACaa < 1:120002/149‑1 (MQ=255) gCCGACGATCAAGCCCTCGATCAGCTGCTCCTGTTCTTTCAGGTCGACTTCTATGGGGTCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCTCTCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCTCCACaa < 4:156795/149‑1 (MQ=255) aCGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGAt > 7:226725/1‑149 (MQ=255) aCGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGAt < 5:292154/149‑1 (MQ=255) cGCTCAAGCCCTCGCTCCCCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATc < 6:230170/149‑1 (MQ=255) cGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATc < 7:44536/149‑1 (MQ=255) gCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTc > 4:86692/1‑123 (MQ=255) gCTCAAGCCCTCGATCACCAGCTCCTGTTATTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGACTTCGCGCTTGAAGCGCTTTCAGGTGACTTc > 4:91185/1‑123 (MQ=255) tCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTgg > 1:295465/1‑149 (MQ=255) tCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTgg > 2:195704/1‑149 (MQ=255) tCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTgg > 8:265138/1‑149 (MQ=255) tCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTgg > 3:209576/1‑149 (MQ=255) tCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACGAAGTCACCgt > 7:37122/1‑128 (MQ=255) tCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACGAAGTCACCgt < 8:37122/129‑2 (MQ=255) aaGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGc < 3:304088/148‑1 (MQ=255) gCCCTCGATAACAAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGt > 2:150816/1‑149 (MQ=255) cccTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGtt < 2:155553/149‑1 (MQ=255) ccTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTg > 8:247459/1‑149 (MQ=255) ccTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTg < 3:67751/149‑1 (MQ=255) cTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGc < 7:70800/149‑1 (MQ=255) cTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGc < 4:63705/149‑1 (MQ=255) gATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCggg > 2:330654/1‑149 (MQ=255) aCCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTc < 1:88222/149‑1 (MQ=255) ccAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCa > 5:303610/1‑149 (MQ=255) cAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTACTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCAc < 1:140509/149‑1 (MQ=255) gCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACgg < 3:237258/149‑1 (MQ=255) cTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAg < 4:7629/148‑1 (MQ=255) cTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGATGCGGGCTTCACGGCAgg > 5:120425/1‑149 (MQ=255) tGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGgt > 3:175064/1‑149 (MQ=255) gTTCTTTTATGTCGATTTCGTTGGTGGGGTATTGGGGG‑TTTTCGGCAAGCAGCCAGACTTTTCTGCCTTCGCGCTTTAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGgt < 2:295465/148‑1 (MQ=255) gTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCTCAACGATCTgt < 8:285633/125‑2 (MQ=255) gTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTgg > 7:285633/1‑125 (MQ=255) ttCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGgt < 1:330654/147‑1 (MQ=255) ttCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGgt < 6:315912/147‑1 (MQ=255) tttCAGGTCGACTTCGATGGGGGCGAATTCGGGGCTTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGtgtg > 1:211128/1‑148 (MQ=255) tCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGTGGGCTTCACGGCAGGTGTGCAc < 5:172038/148‑1 (MQ=255) cAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGGTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGAGCTGGCCGTTGCTGGCTTCACGGCAGGTGTGCAcc < 6:336376/148‑1 (MQ=255) aGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGc < 4:207674/149‑1 (MQ=255) gTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGc > 6:64607/1‑147 (MQ=255) tCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCcag < 1:195704/149‑1 (MQ=255) cTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAgg > 8:180607/1‑149 (MQ=255) gATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGc > 5:10110/1‑149 (MQ=255) ggggCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGt < 7:180607/148‑1 (MQ=255) ggggCGAATTCGGGG‑GTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGt < 4:33293/148‑1 (MQ=255) gggCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGgt > 6:209588/1‑124 (MQ=255) gCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCg > 8:150502/1‑147 (MQ=255) gCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGaa < 6:214744/149‑1 (MQ=255) aaTTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGAt > 7:254515/1‑149 (MQ=255) tCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGcc > 6:120783/1‑149 (MQ=255) gggg‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCTCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGa < 2:309017/149‑1 (MQ=255) gggg‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGtt < 5:149670/96‑1 (MQ=255) gggg‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGtt > 6:149670/1‑96 (MQ=255) ttCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTcc < 6:117947/148‑1 (MQ=255) tCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCt < 4:209576/148‑1 (MQ=255) ggCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACGGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCtt > 8:247218/1‑147 (MQ=255) ggCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTtc < 1:317025/148‑1 (MQ=255) gCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTtcat > 5:298017/1‑149 (MQ=255) cAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTtcatg < 6:10110/149‑1 (MQ=255) aaGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTtcatgc > 5:215475/1‑149 (MQ=255) gcagcCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTtca < 1:129304/144‑1 (MQ=255) cagcCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTtcatgctca < 3:227879/149‑1 (MQ=255) cAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGcc < 7:78534/149‑1 (MQ=255) aGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGAc < 5:92982/130‑1 (MQ=255) tgctgcCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCTTGTAcg > 8:239723/1‑149 (MQ=255) tgctgcCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTAc < 8:254515/148‑1 (MQ=255) ctgcCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTAcgcg > 3:89292/1‑149 (MQ=255) ccTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCgcag > 3:16472/1‑149 (MQ=255) gcTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGAt > 6:309787/1‑106 (MQ=255) gcTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGAt < 5:309787/106‑1 (MQ=255) gcTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAg > 8:102247/1‑149 (MQ=255) cTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGt > 6:332014/1‑149 (MQ=255) gAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCgcag < 7:194202/138‑1 (MQ=255) gAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCgcag > 8:194202/1‑138 (MQ=255) aaGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCgg < 5:120783/148‑1 (MQ=255) gcgcTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCtt > 5:300076/1‑149 (MQ=255) ttGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTgggg > 8:255654/1‑149 (MQ=255) catcGGTGACGAAGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTgggg > 3:146232/4‑148 (MQ=255) catcGGTGACGAAGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTgggg < 4:146232/145‑1 (MQ=255) atcGGTGACGAAGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGt > 8:236059/3‑149 (MQ=255) atcGGTGACGAAGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGt > 4:36832/3‑149 (MQ=255) ggTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTgg > 5:65550/1‑148 (MQ=255) gTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTgg > 1:218075/1‑147 (MQ=255) tGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTGgaag < 4:175064/149‑1 (MQ=255) cTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTc < 4:194989/130‑1 (MQ=255) cTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTc > 3:194989/1‑130 (MQ=255) cTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTGGaagaag < 6:298017/149‑1 (MQ=255) cTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTGGaagaag < 4:89292/149‑1 (MQ=255) ttCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGgt > 8:209579/1‑54 (MQ=255) ttCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGgt < 7:209579/54‑1 (MQ=255) ttCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTGga < 5:320922/143‑1 (MQ=255) ttCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTGga > 6:320922/1‑143 (MQ=255) ttCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTGGAAGAAgg > 3:120857/1‑149 (MQ=255) | CAGCGGCGAATGACGCCGACGCTCAAGCCCTCGATCACCAGCTCCTGTTCTTTCAGGTCGACTTCGATGGGGGCGAATTCGGGG‑TTTTCGGCAAGCAGCCAGACTTTGCTGCCTTCGCGCTTGAAGCGCTTGACGGTGACTTCGTCACCGATGCGCGCCACAACGATCTGGCCGTTGCGGGCTTCACGGCAGGTGTGCACCGCCAGCAGGTCGCCGTCGAAGATGCCGACGTCCTTCATGCTCATGCCGTGTACGCGCAGCAAATAGTCGGCTTGGGGGTGGAAGAAGG > NC_002947/2444904‑2445192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |