| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,445,358 | G→C | 6.4% | R52G (CGC→GGC) | lexA‑I ← | transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,445,358 | 0 | G | C | 6.4% | 356.8 / 10.2 | 110 | R52G (CGC→GGC) | lexA‑I | transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base G (49/54); new base C (4/3); total (53/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.09e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.22e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
TTGCTCGATGTGCTGTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTTGGCGTGGCGTCAGTTT > NC_002947/2445212‑2445505 | ttGCTCGATGTGCTGTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCgg < 8:113606/148‑1 (MQ=255) cTCGATGTGCTGTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGc > 4:42357/1‑147 (MQ=255) gttgtgCTGTTGGTCATGAATCGGCGCACCGGCAGGGAG‑GCGGCCGATGATGGGCATGCCGGCTTGTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAgg < 5:112621/146‑1 (MQ=255) gATGTGCTGTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAgg < 3:201481/148‑1 (MQ=255) gtgCTGTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCt > 6:93272/1‑149 (MQ=255) tgCTGTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCtt > 2:49608/1‑149 (MQ=255) tgCTGTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCtt < 5:93272/149‑1 (MQ=255) gTTCGGCAAGAATCGGCGCACCGGCAGCGACGCCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAg > 1:34738/1‑140 (MQ=255) gTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAg < 2:34738/139‑1 (MQ=255) ttCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAg < 7:99507/147‑1 (MQ=255) ttCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGt > 1:222249/1‑149 (MQ=255) ggCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGc < 3:199224/148‑1 (MQ=255) ggCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCATCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGct > 2:139180/1‑149 (MQ=255) gCAAGAATCGGCGGCCCGGCAGCGAC‑CCGGCCGATTATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGctc < 2:222249/149‑1 (MQ=255) gCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGctc > 8:106984/1‑149 (MQ=255) gAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTcg > 2:240161/1‑149 (MQ=255) aaTCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTcgg < 5:327698/149‑1 (MQ=255) tCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTcggcg > 4:64296/1‑149 (MQ=255) gcgcACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGCGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGAAAGGG‑CCTTGAGTTGATCCGcggcggaa > 5:277918/1‑147 (MQ=255) gcACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCAtt < 7:153227/149‑1 (MQ=255) gcACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCAtt < 7:106984/149‑1 (MQ=255) aCCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTgg < 8:288291/149‑1 (MQ=255) gCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGa > 3:285668/1‑149 (MQ=255) gCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACtt < 8:41256/149‑1 (MQ=255) aC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCtt > 6:54101/1‑116 (MQ=255) aC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCtt < 5:54101/116‑1 (MQ=255) c‑ccGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAg > 2:310134/1‑149 (MQ=255) ccGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGc > 4:111960/1‑149 (MQ=255) ccGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGc > 8:4059/1‑149 (MQ=255) gCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCGGGCGTCATTTCGATCGCGCCGTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCa < 7:74099/149‑1 (MQ=255) gCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAg > 4:299018/1‑114 (MQ=255) gCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAg < 3:299018/114‑1 (MQ=255) gatgatGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCt > 7:83687/1‑149 (MQ=255) gatgatGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCt > 1:224086/1‑149 (MQ=255) gatgatGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCt < 1:327487/149‑1 (MQ=255) atgatgGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGGCCCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCt < 1:230169/149‑1 (MQ=255) tgGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGa < 5:198200/149‑1 (MQ=255) ggCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGACGGCATTGGGCGACTTGAAGCCCAGCTCCTGAg > 6:114403/1‑148 (MQ=255) gCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGc > 7:117167/1‑148 (MQ=255) gCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGACGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAAtct < 5:114403/149‑1 (MQ=255) cGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCg < 3:42357/149‑1 (MQ=255) cGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCg > 1:153189/1‑149 (MQ=255) ttcttcAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGt < 3:237495/95‑1 (MQ=255) ttcttcAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGt > 4:237495/1‑95 (MQ=255) ttcAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGaa > 5:191000/1‑120 (MQ=255) ttcAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGaa < 6:191000/120‑1 (MQ=255) ttcAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGa > 3:299200/1‑133 (MQ=255) ttcAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGa < 4:299200/133‑1 (MQ=255) cAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCgg < 6:179626/146‑1 (MQ=255) ccTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGa < 2:152191/109‑1 (MQ=255) ccTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGa > 1:152191/1‑109 (MQ=255) ccTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCgg > 4:216136/1‑143 (MQ=255) ccTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCgg < 3:216136/143‑1 (MQ=255) ccTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGc < 3:64296/149‑1 (MQ=255) cTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCg > 4:55512/1‑149 (MQ=255) tGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCATGAGGTCCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCgg > 3:67375/1‑148 (MQ=255) ggCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTcggcg > 4:45018/1‑94 (MQ=255) ggCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCggg > 1:143158/1‑148 (MQ=255) gCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCgg > 3:280519/1‑146 (MQ=255) cTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAg > 8:103388/1‑149 (MQ=255) ttCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGc < 8:241120/100‑1 (MQ=255) ttCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGc > 7:241120/1‑100 (MQ=255) ttCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGc > 7:88428/1‑149 (MQ=255) ttCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGc > 6:202312/1‑149 (MQ=255) caggccaggGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCg < 3:55512/148‑1 (MQ=255) aggccaggGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGtt > 5:250279/1‑149 (MQ=255) ggccaggGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTg < 7:103388/149‑1 (MQ=255) caggGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCt > 3:178296/1‑149 (MQ=255) cggatgcCGCGGGAAGCGCCCGGCGTGATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCa < 8:176021/149‑1 (MQ=255) cggatgcCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGc < 4:178296/148‑1 (MQ=255) cggatgcCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCa < 7:4059/149‑1 (MQ=255) cgcgGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCtt > 1:109506/1‑148 (MQ=255) cgcgGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTtg < 4:285668/149‑1 (MQ=255) cgcgGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGAGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGAGCtt > 3:43488/1‑148 (MQ=255) gcgGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTtga < 3:244216/149‑1 (MQ=255) ggAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTtgatga < 3:111960/149‑1 (MQ=255) gAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGaa < 8:83687/149‑1 (MQ=255) ggCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAAt < 6:250279/149‑1 (MQ=255) gCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAAtt > 8:39033/1‑149 (MQ=255) gTCATTTCGATCGCGCCCTTGCGGTCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTc < 4:67375/149‑1 (MQ=255) aTTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCgg < 1:139180/148‑1 (MQ=255) aTTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGc > 1:306786/1‑149 (MQ=255) aTTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGc > 3:303068/1‑149 (MQ=255) aTTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTACTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGc > 6:138940/1‑149 (MQ=255) ttCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCtt > 3:213685/1‑149 (MQ=255) gATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCATCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTtggc > 8:158875/1‑149 (MQ=255) ctcaaggcCCTTGCCCGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTtggc > 6:43001/7‑149 (MQ=255) tCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTtggcgt > 5:54201/1‑149 (MQ=255) tCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTtggcgt < 2:224086/149‑1 (MQ=255) aaggcCCTTGCCCGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTtggcgtg > 1:320334/4‑149 (MQ=255) gcgcCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTtggcgtgg > 1:306011/1‑149 (MQ=255) gcgcCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTtggcgtg < 1:310134/148‑1 (MQ=255) aggcCCTTGCGGGCAAGGG‑CCTTGAGGTGGTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTtggcgtgg > 3:286820/3‑149 (MQ=255) aggcCCTTGCCCGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCgag < 5:215269/129‑1 (MQ=255) ggcCCTTGCCCGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAAcgcg > 2:202562/2‑128 (MQ=255) ggcCCTTGCCCGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAAcgcg < 1:202562/127‑1 (MQ=255) cccTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAAc > 3:260502/1‑123 (MQ=255) cccTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAAc < 4:260502/123‑1 (MQ=255) cccTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTTggcgtggcgt < 4:303068/149‑1 (MQ=255) gggCAAGGG‑CCTTGAGGTGCTCCTCGGAGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTTGGCGTGGCGTCAGttt > 1:9106/1‑148 (MQ=255) | TTGCTCGATGTGCTGTTCGGCAAGAATCGGCGCACCGGCAGCGAC‑CCGGCCGATGATGGGCAGGCCGGCTTCTTCAGCCTTGGCTTCCAGGCCAGGGATGCGGATGCCGCGGGAAGCGCCCGGCGTCATTTCGATCGCGCCCTTGCGGGCAAGGG‑CCTTGAGGTGCTCCTCGGCGGCATTGGGCGACTTGAAGCCCAGCTCCTGAGCAATCTCGGCGCGGGTAGGCGGGAAGCCGTTGTCTTCCAGGCAGCGCTTGATGAACGCGAGAATTTCGGCTTGGCGTGGCGTCAGTTT > NC_002947/2445212‑2445505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |