| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,456,785 | G→A | 5.0% | intergenic (+36/‑145) | gapB → / → PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,456,785 | 0 | G | A | 5.0% | 307.9 / 3.3 | 101 | intergenic (+36/‑145) | gapB/PP_2150 | glyceraldehyde‑3‑phosphate dehydrogenase/thiamine biosynthesis lipoprotein |
| Reads supporting (aligned to +/- strand): ref base G (38/57); new base A (2/3); total (40/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.14e-01 | |||||||||||
Only 100 of 105 total aligned reads displayed.
ACAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACT > NC_002947/2456637‑2456929 | aCAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCg < 7:146048/149‑1 (MQ=255) cAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCgg < 7:187371/149‑1 (MQ=255) ccGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGtt > 2:79376/1‑149 (MQ=255) cgcgTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTc > 2:23101/1‑149 (MQ=255) gttgttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCCGAAGGTTCCCg < 7:30067/149‑1 (MQ=255) ttgttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCCGAAGGTTCCCG‑t < 5:183186/149‑1 (MQ=255) tgttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑tt > 1:131541/1‑149 (MQ=255) ttCTGTACGTCTGGTACGACAACGGATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑tttt < 1:181052/149‑1 (MQ=255) ttCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑ttt < 6:191674/148‑1 (MQ=255) tGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑ttttttt > 3:187031/1‑149 (MQ=255) gTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑tttttttt > 4:118047/1‑149 (MQ=255) tACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑ttttttt < 3:146715/147‑1 (MQ=255) aCGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTa > 3:54049/1‑149 (MQ=255) cGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTAt > 1:90287/1‑149 (MQ=255) gTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTAtt < 2:90287/149‑1 (MQ=255) tGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCt > 4:2626/1‑148 (MQ=255) gTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCt < 7:181718/146‑1 (MQ=255) gTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGaa < 3:107283/149‑1 (MQ=255) tACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAt < 3:118047/149‑1 (MQ=255) aCAAGGAATTCGGGTATAGGTGCCTGGTGGTTCGTGTGCTGGAAGACATGGGTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGTCAATGAAAACACGGTAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgt < 8:61113/149‑1 (MQ=255) aCAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTTGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgt > 7:290474/1‑149 (MQ=255) aCAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGaaatatt > 2:202689/1‑144 (MQ=255) aCAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgt > 7:80266/1‑149 (MQ=255) cAACGATTTCGGTTATTTCTGCCAGGTGGTTCGGGTGATGGAAGACATGGCTGGTGTGACCCCGCCAGCGTTTGCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgt < 7:256824/148‑1 (MQ=255) cAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGTCTGGTGTTAACCCGCCAGCGTTTCCACGCTGATTCGCTTTTAAGTCAATTAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgtg < 4:66922/149‑1 (MQ=255) aaCGACTTCGGTTATAGCTGCCATGTGGGTCGTGTGATGGAAGACATGGCTTGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATgtgtgt < 6:249799/149‑1 (MQ=255) aaCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgtg < 1:120430/148‑1 (MQ=255) aaCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAAtgtgtg > 2:120430/1‑148 (MQ=255) aaCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATgtgtgt > 6:335065/1‑149 (MQ=255) aaCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATgtgtgt > 1:254087/1‑149 (MQ=255) aaCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATgtgtgt > 5:72834/1‑149 (MQ=255) aCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGtgtt < 8:10156/149‑1 (MQ=255) aCGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGtgtt < 8:104171/149‑1 (MQ=255) aTTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCa < 5:157339/149‑1 (MQ=255) aTTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTAGGGTTCCCG‑TTTTTTTTTATTCTTAATGTGTGTTGTCa > 3:235469/1‑149 (MQ=255) gTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGCGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGtgttgt > 6:135508/1‑142 (MQ=255) gTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGCGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGtgttgt < 5:135508/142‑1 (MQ=255) tGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCttt > 5:158846/1‑149 (MQ=255) tGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCttt > 4:187956/1‑149 (MQ=255) ccAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTc < 6:78243/148‑1 (MQ=255) aGGTGGTTCGTGTGATGGACGACATGGCTGGTGTGACCCCGCCAGCGTTTCCACGCGGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTcgcg < 8:287330/149‑1 (MQ=255) aGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTcgcg > 3:213146/1‑149 (MQ=255) ggtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAAGGGTAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCgg < 3:126185/149‑1 (MQ=255) ggtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCgg < 1:23101/149‑1 (MQ=255) ggtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCgg < 5:161250/149‑1 (MQ=255) ggtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTACCGGCCCTTTCGCgg < 2:254087/149‑1 (MQ=255) gggggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGATTGTGTGTTGTCAGTGCCGGCCCTTTCGCgg < 1:195503/146‑1 (MQ=255) gtggtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCggg > 7:118294/1‑149 (MQ=255) gtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTa < 2:41085/148‑1 (MQ=255) gtTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTa > 8:57165/1‑148 (MQ=255) gtgtGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAcc < 3:187956/148‑1 (MQ=255) tgATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTTGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGc < 8:290474/148‑1 (MQ=255) tgATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGc < 8:20612/148‑1 (MQ=255) tgATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCt > 5:801/1‑149 (MQ=255) aTGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTcc > 4:50836/1‑149 (MQ=255) aTGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTc < 1:79376/148‑1 (MQ=255) tGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCGTTTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTc < 8:2863/148‑1 (MQ=255) gAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTTTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTa < 1:210185/148‑1 (MQ=255) aaGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACa < 7:154705/149‑1 (MQ=255) ataCATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGATTGTAAGGCAATGAAAAAACGGTAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACa < 1:202689/146‑1 (MQ=255) aCATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGa < 5:335065/149‑1 (MQ=255) tgtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGc < 6:42488/149‑1 (MQ=255) tgtgAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGc < 3:50836/149‑1 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc > 2:161757/1‑144 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGccc < 1:161757/144‑1 (MQ=255) ccGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTg > 5:308843/1‑147 (MQ=255) gCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑Agg < 6:801/149‑1 (MQ=255) ccAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCGCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑Ag > 6:157808/1‑147 (MQ=255) aGCTTTTCCACGCTGATTCGCTTGTAAGGCAATGATAAAACGGGACCCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGc < 8:139635/149‑1 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCgg < 4:213146/149‑1 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCgg < 6:308843/149‑1 (MQ=255) cGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCAACTACAGGATTATAGCTGGCCCGGT‑TGGAGCgg > 1:141534/1‑149 (MQ=255) gTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCggg < 7:231444/149‑1 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCGCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGttgcg < 5:157808/149‑4 (MQ=255) cACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑c < 3:2626/149‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCg < 1:101977/86‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCg > 2:101977/1‑86 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑cc < 5:326327/149‑1 (MQ=255) aCGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCTAAAGGCTTTTAGCTGGCCCGGT‑AGGAGCGGGGTTA‑cc > 4:204698/1‑149 (MQ=38) gCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCcg < 6:72834/149‑1 (MQ=255) cTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGGGCAGCGATAATCCTGT‑AGGAGCGGGTTTA‑CCcgc < 8:118294/149‑1 (MQ=25) tttCGCTTGAAAGGAAATTAAAAACCGGTAACCTGGGGGTTCCCT‑TTTTTTTTTATTCTTAATGTGTGTTGTCTGGGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACTGTATTATCGCTGCCCCTGT‑AGTTGCGGTTTTA‑CCCGCGa < 2:141534/147‑1 (MQ=25) ttCGCTTGTAAGGCAATGAAAAAACGCGAACCTCCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCAACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGaa < 3:204698/148‑1 (MQ=255) tCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACCCCAACTAAACGATTATAGCTGCCCCAGT‑AGGAGCGGGTTTA‑ACcccgca > 4:122893/1‑145 (MQ=255) ccatcttAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGAaga < 5:255954/142‑1 (MQ=255) gCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGTTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAgg > 3:39989/1‑149 (MQ=255) aaGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CGCGCGAagc > 6:255954/1‑140 (MQ=255) gCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGGGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACCg < 4:187031/149‑1 (MQ=255) cAATGAAAAAACGGGACCCTTCGGGTTCCCG‑GTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTATACCCGCTCCTACAGGGTTATCGCTGGCCCAGT‑AGGAGGGGGGTTT‑CCCGCGACGAGGCCCGCCCCgg > 5:19245/1‑149 (MQ=37) tcaaaaaaC‑GGCACCTTCCGGTTTCCGTTTTTTTTTTATTCTTAATGTGTGTTGGCCGTCCCGGCCCTTGCGCGGGTAACCCCGTCCCTACCGTTTTTTCGCGCCCCCTGT‑CGCTGGGGTTTAA‑CCCGCGAAGAGGCCAGCACCGGCaa < 4:39989/147‑1 (MQ=255) gAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAAACAGCGCCGACAGGGTTATAGCTGCCCCGGG‑AGGAGCGGGTTTT‑CCCGCGGAGAGGCCAGGACCGGGAAc > 4:76859/1‑149 (MQ=255) aaaaCGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACCGGCAACCga < 7:57165/149‑1 (MQ=255) aaaCCGGCACCCTGGGGGGCCCGTTTTTTTTTTATTCTCACTGTGGGTTGCCCGCCCCGCCCCTTCCGCGGTAAACCCCGCCCCACCCGCATAACCCCTCCCCCTGT‑CGGCG‑GGGTTTACCCCGCGAAGAGGCCAGCACCGGCAACCga < 6:19245/149‑1 (MQ=255) aaCGGGAACCCGAAGGTTCCCG‑TTTTTTATTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAGACCCGCTCCTAAAGCATTATCGCTg > 4:47968/1‑98 (MQ=25) aCGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTcgcg < 4:179268/67‑1 (MQ=25) aCGGGAACCCGAAGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTcgcg > 3:179268/1‑67 (MQ=25) gggAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACCGGCAACCGAGAAAc > 6:135560/1‑149 (MQ=255) cTTCGTGTTGCTG‑TTTTTTTTTATTCTGATTGTGTTTTCTCAGTGCCGGCGCTTTGGCTGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTTT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACCGGCAGCCGAGAAACCCTACt < 4:235469/149‑1 (MQ=37) cTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACt > 4:227746/1‑149 (MQ=255) cGGTTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGTCTGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACt < 1:252009/147‑1 (MQ=255) | ACAACCGCGTTGTTCTGTACGTCTGGTACGACAACGAATTCGGTTATAGCTGCCAGGTGGTTCGTGTGATGGAAGACATGGCTGGTGTGAACCCGCCAGCGTTTCCACGCTGATTCGCTTGTAAGGCAATGAAAAAACGGGAACCTTCGGGTTCCCG‑TTTTTTTTTATTCTGAATGTGTGTTGTCAGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGATTATCGCTGCCCCTGT‑AGGAGCGGGTTTA‑CCCGCGAAGAGGCCAGCACCGGCAACCGAGAAACCCTACT > NC_002947/2456637‑2456929 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |