| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,458,097 | G→C | 6.2% | intergenic (+169/‑36) | PP_2150 → / → sthA | thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,458,097 | 0 | G | C | 6.2% | 319.9 / 8.1 | 97 | intergenic (+169/‑36) | PP_2150/sthA | thiamine biosynthesis lipoprotein/pyridine nucleotide transhydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (44/47); new base C (3/3); total (47/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.49e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
CCGCCAGGGAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGACCGTCG > NC_002947/2457950‑2458245 | ccgccAGGGAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCgcgagcga < 5:127610/149‑1 (MQ=255)ccgccAGGGAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCgcgagcg < 5:213443/148‑1 (MQ=255) ccAGGGAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCg < 2:84610/149‑1 (MQ=255) aGGGAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACAGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTg > 5:308224/1‑149 (MQ=255) ggAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGc > 1:215291/1‑149 (MQ=255) tGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGc < 5:165597/149‑1 (MQ=255) ggTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCgg < 6:131875/149‑1 (MQ=255) ggTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCAAGCCACGGTCGCTCGCgg < 1:281719/149‑1 (MQ=255) gTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCggg > 5:85503/1‑149 (MQ=255) aaGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCGGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGc > 5:65484/1‑147 (MQ=255) aGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCa < 6:74234/148‑1 (MQ=255) aGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAg > 2:31911/1‑149 (MQ=255) gCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTG‑CCCGCAAGCCACGGTCGCTCGCGGGGCacga < 1:62903/149‑4 (MQ=255) tGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGt < 3:31073/129‑1 (MQ=255) tGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGt > 4:31073/1‑129 (MQ=255) gTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGAGTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGGTCTg > 6:250199/1‑147 (MQ=255) tAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGaa < 2:310255/148‑1 (MQ=255) tAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGaa < 1:293535/148‑1 (MQ=255) tAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGGTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGaa < 5:315868/148‑1 (MQ=255) gTGCGGGCAAAATTGGCCTACGACGCGACCCCGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 1:249403/149‑1 (MQ=255) gTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAgg < 3:164475/148‑1 (MQ=255) gTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGa < 6:85503/149‑1 (MQ=255) tGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAg > 4:17200/1‑149 (MQ=255) gCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTg < 4:193513/138‑1 (MQ=255) gCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTg > 3:193513/1‑138 (MQ=255) cAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCa > 8:37781/1‑149 (MQ=255) aaTTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATgg < 2:215291/149‑1 (MQ=255) cTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGt < 4:197970/108‑1 (MQ=255) cTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGt > 3:197970/1‑108 (MQ=255) cTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTa > 3:70169/1‑135 (MQ=255) cTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTa < 4:70169/135‑1 (MQ=255) cTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTa > 8:289699/1‑149 (MQ=255) tACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGaa < 6:163279/128‑1 (MQ=255) tACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGaa > 5:163279/1‑128 (MQ=255) cgacgCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGATCGACAGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACaa > 3:209846/1‑149 (MQ=255) cgacgCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACaa < 1:296965/149‑1 (MQ=255) gcgACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTac < 3:2687/149‑1 (MQ=255) gACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTacga > 2:195879/1‑149 (MQ=255) gACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTacga > 3:85192/1‑149 (MQ=255) aCCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTacgac > 4:180264/1‑149 (MQ=255) aGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAg < 2:57396/149‑1 (MQ=255) gggTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgt > 1:265641/1‑149 (MQ=255) ggTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTGCGCATGGCTGTCTACAACTACGACGTAgtg > 5:72447/1‑149 (MQ=255) gTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgtgg > 4:270370/1‑149 (MQ=255) gTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgtg < 1:70305/148‑1 (MQ=255) tgtgCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCt < 3:17200/148‑1 (MQ=255) gcgcGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGt > 4:37426/1‑149 (MQ=255) ttCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTccggccc < 1:31911/149‑1 (MQ=255) gggTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCcggcccggcc > 3:218316/1‑149 (MQ=255) ggTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCccggccg > 4:270021/1‑149 (MQ=255) ggTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCAAGCCACGGTCGCTCGCggg < 4:60190/80‑1 (MQ=37) ggTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCAAGCCACGGTCGCTCGCggg > 3:60190/1‑80 (MQ=37) gTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCccggccgg < 7:289699/149‑1 (MQ=255) ttGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGt < 3:270021/149‑1 (MQ=255) aTTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTg > 3:246698/1‑147 (MQ=255) gACTGCACCCGTATTTTCTCATGGCGCCCCGGCGGGATGATCGTGCCCCGCGAGCGTCAGTGGCTTCCGGGCCAGTTCTGAAGGTGTACCCATGGCTGTCTACAAGTACGAGGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAATgc < 2:71664/148‑1 (MQ=255) aCTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGgcgc > 7:234984/1‑149 (MQ=255) cTGCACCCGAATTTTCTCATGGCTCCCCGGCGGCATGATCGTTCCCCTCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGcgcg < 3:169816/149‑1 (MQ=255) aCCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCaa < 6:308224/149‑1 (MQ=255) aCCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCAGGTGAAGGCGCGGCaa > 2:255280/1‑149 (MQ=255) cccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAAt < 3:270370/149‑1 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgtg > 7:110700/1‑110 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAgtg < 8:110700/110‑1 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAg < 6:211407/138‑1 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAg > 5:211407/1‑138 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGgcgc > 4:268640/1‑142 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGgcgc < 3:268640/142‑1 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAAt > 6:250597/1‑148 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAAt > 8:32662/1‑148 (MQ=255) ccGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTCCCGGCCCGGCCGGTGAAGGCGCGGCAAt > 2:156858/1‑148 (MQ=255) gAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGaa > 7:25236/1‑149 (MQ=255) aaTTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAAc < 3:288957/149‑1 (MQ=255) ttttCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAAt > 4:220820/1‑143 (MQ=255) ttttCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAAt < 3:220820/143‑1 (MQ=255) tctcATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAAcgccgc > 6:106202/1‑149 (MQ=255) ctcATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTGCGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAAcgccgc < 6:72447/148‑1 (MQ=255) aTGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCaaa < 4:218316/149‑1 (MQ=255) tGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAg > 2:99500/1‑149 (MQ=255) gcCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAgg < 2:265641/149‑1 (MQ=255) cccGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGgc > 6:96070/1‑149 (MQ=255) cccGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGgc < 3:180264/149‑1 (MQ=255) cccGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACAACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGAGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGgc < 2:88923/149‑1 (MQ=255) gcggcATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCaa < 4:85192/149‑1 (MQ=255) gcggcATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCaa < 6:163621/149‑1 (MQ=255) cATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAgg > 5:158253/1‑147 (MQ=255) tGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGc < 7:37781/149‑1 (MQ=255) tGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGc < 7:32662/149‑1 (MQ=255) gATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGc > 8:39662/1‑148 (MQ=255) ctggcccGCAAGCCACGGTCGCTCGCGGGGCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGACCGCCGCCAAAGCAGGGCGCAAGGTAGCGATgg > 2:109657/5‑149 (MQ=255) tGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGt < 3:37426/149‑1 (MQ=255) gCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTccggc < 6:13594/89‑1 (MQ=255) gCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTccggc > 5:13594/1‑89 (MQ=255) gcccGCAAGCCACGGTCGCTCGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTc > 4:1779/2‑148 (MQ=255) ccccGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTc < 7:71535/148‑1 (MQ=255) ccGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTc > 7:137496/1‑146 (MQ=255) ccGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTc < 8:137496/146‑1 (MQ=255) cgcgAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCaaa < 3:52274/121‑1 (MQ=255) cgcgAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCaaa > 4:52274/1‑121 (MQ=255) gagcgaCCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTCCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGAcc < 1:156858/149‑1 (MQ=255) gaCCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGAAAGGTAGCGATGGTCGATGACCGTCg > 7:113656/1‑149 (MQ=255) | CCGCCAGGGAATGGGTGAAGCATATGTAGTGCGGGCAAAATTGGCCTACGACGCGACCAAGGGTTAATGTGCGCGGCGTTCAGGGTTGATTAGACTGCACCCGAATTTTCTCATGGCGCCCCGGCGGCATGATCGTGCCCCGCGAGCGACCGTGGCTTGCGGGCCAGTTCTGAAGGAGTACGCATGGCTGTCTACAACTACGACGTAGTGGTGCTGGGTTCCGGCCCGGCCGGTGAAGGCGCGGCAATGAACGCCGCCAAAGCAGGGCGCAAGGTAGCGATGGTCGATGACCGTCG > NC_002947/2457950‑2458245 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |