| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,468,261 | G→C | 10.5% | intergenic (‑25/+98) | PP_2161 ← / ← PP_2162 | hypothetical protein/phosphonoacetaldehyde phosphonohydrolase‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,468,261 | 0 | G | C | 10.5% | 245.9 / 15.0 | 85 | intergenic (‑25/+98) | PP_2161/PP_2162 | hypothetical protein/phosphonoacetaldehyde phosphonohydrolase‑like protein |
| Reads supporting (aligned to +/- strand): ref base G (34/41); new base C (3/6); total (37/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTCCACCAGGCAGGT > NC_002947/2468113‑2468409 | gTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTgg > 7:276969/1‑149 (MQ=255) ttGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGAGGGCAGGCATTGGCTATTCTCCATCAATGGCTTgg > 2:86511/1‑148 (MQ=255) tCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCAt > 7:148385/1‑149 (MQ=255) gATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCAt < 5:285794/147‑1 (MQ=255) gATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGCCAAGCCAtt < 3:61842/148‑2 (MQ=255) tCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCACAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGAc > 2:61645/1‑149 (MQ=255) cTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGCCAAGCCATTGatg < 4:264936/149‑3 (MQ=255) gcgcgcCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACctct > 5:250688/1‑149 (MQ=255) gcgcgcCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGCCAAGCCATTGa < 8:86209/144‑1 (MQ=255) gcgcCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTTGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGc < 1:61974/149‑1 (MQ=255) gcCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGa > 3:71782/1‑149 (MQ=255) gcCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGa > 7:276829/1‑149 (MQ=255) gcCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGCCAAGCCAt > 6:24853/1‑137 (MQ=255) gcCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGCCAAGCCAt < 5:24853/137‑1 (MQ=255) ctctTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACg < 7:222047/149‑1 (MQ=255) ctTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACggg > 4:182472/1‑147 (MQ=255) ttCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGt < 3:197009/147‑1 (MQ=255) cGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTgg < 7:269998/147‑1 (MQ=255) cGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTg < 8:276829/146‑1 (MQ=255) cAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAg < 4:247450/148‑1 (MQ=255) cAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAg < 8:148385/148‑1 (MQ=255) ggcggcCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTc > 6:335012/1‑149 (MQ=255) cggcCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑g < 5:329499/149‑1 (MQ=255) ggcCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑gg > 2:208004/1‑149 (MQ=255) ggcCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑gg < 1:257702/149‑1 (MQ=255) gcCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGc < 7:222019/149‑1 (MQ=255) cAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCAGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCACCATAAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGATCT‑GGCCt > 5:32285/1‑149 (MQ=255) ttcttcCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGCCAAGCCATTGatgg > 1:298904/1‑114 (MQ=255) ttcttcCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGCCAAGCCATTGatgg < 2:298904/117‑4 (MQ=255) cttcCGAAAGCGTTACGTTGCGGTCCAGTTGCTCTCGGAAGCTGTTCAGGCGCTGTTGGAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGTCAAGCCATGGACCTCTGCGACGTGGCAAAGGTGGT‑GTCCTGTCTTc < 6:32285/147‑1 (MQ=255) cttcCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCTTTGGCTATTCTCCATCAATGCCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCttta < 1:86511/148‑3 (MQ=255) cttcCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAg > 3:299006/1‑149 (MQ=255) ccGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAg < 4:71782/146‑1 (MQ=255) gAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGc < 1:264695/114‑1 (MQ=255) gAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGc > 2:264695/1‑114 (MQ=255) aaaGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAAt < 3:34521/149‑1 (MQ=255) aaaGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTGCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAAt < 5:256058/149‑1 (MQ=255) aaGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATc < 2:6957/149‑1 (MQ=255) aGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAATGGTTCT‑GGCCTGTCTTCAGGGTAATCt < 1:183277/149‑1 (MQ=255) cGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGATGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTAc < 6:26352/149‑1 (MQ=255) tACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACctg < 6:170724/149‑1 (MQ=255) cGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACctgct < 6:317491/149‑1 (MQ=255) gTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCTCTCTTGCAATTCGCGGGCAGGCATTGGGTATTCTCCATCAATGGCTTGGCAAGCCATGGACGTCTGCGAGGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACctgctg < 6:250688/149‑1 (MQ=255) gTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACctgctg > 2:165949/1‑149 (MQ=255) gTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACctgctg > 2:208311/1‑149 (MQ=255) gCGGTCCAGTTGCTCGCACAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGc < 1:61645/148‑1 (MQ=255) gTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGAtt > 5:176479/1‑149 (MQ=255) gTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGAtt > 2:282415/1‑149 (MQ=255) tCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAGTCTACCTGCTGCCGATTTGCATGATcc > 5:55153/1‑149 (MQ=255) gcgcAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCcgc < 8:276969/149‑1 (MQ=255) aGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCaa < 4:299006/149‑1 (MQ=255) ttCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACgg > 6:6600/1‑149 (MQ=255) ttCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACgg > 2:330791/1‑149 (MQ=255) ttCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACgg < 5:245348/149‑1 (MQ=255) tCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGc > 7:212480/1‑149 (MQ=255) aGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCt < 6:176479/148‑1 (MQ=255) cgcTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTAt < 1:330791/149‑1 (MQ=255) gcTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCcgc < 8:244886/132‑1 (MQ=255) gcTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCcgc > 7:244886/1‑132 (MQ=255) gcTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTc < 6:257777/135‑1 (MQ=255) gcTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTc > 5:257777/1‑135 (MQ=255) ctctTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGCCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCa < 6:190990/149‑1 (MQ=255) gCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAgg < 8:212480/146‑1 (MQ=255) gCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGtt > 6:140861/1‑149 (MQ=255) cAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGttt > 5:32375/1‑149 (MQ=255) aTTAGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTCCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGtttt > 8:73976/1‑148 (MQ=255) ttCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTc < 1:165949/149‑1 (MQ=255) cgcgGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCa < 5:335012/148‑1 (MQ=255) gcgGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCAcc < 1:208004/149‑1 (MQ=255) gcgGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCAcc < 1:282415/149‑1 (MQ=255) aTTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCgg > 1:271821/1‑149 (MQ=255) aTTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCgg < 1:208311/149‑1 (MQ=255) ttGGCTATTCACCATCAATGGCTTAGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGgc > 6:106245/1‑149 (MQ=255) ggCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGgcgc > 6:282389/1‑149 (MQ=255) tATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGAttt < 2:6024/92‑1 (MQ=255) tATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGAttt > 1:6024/1‑92 (MQ=255) ttCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGc > 8:55450/1‑149 (MQ=255) ctcCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCg < 5:6600/148‑1 (MQ=255) ccATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATg > 8:79778/1‑149 (MQ=255) cATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATg < 5:140861/148‑1 (MQ=255) tccaTGGCTTGCCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTc > 1:51437/4‑148 (MQ=255) cAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTcca > 1:231762/1‑149 (MQ=255) aaTGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTccac > 7:109904/1‑149 (MQ=255) tGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTccacca < 7:79778/149‑1 (MQ=255) ggCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCTGGGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTccac > 1:229677/1‑147 (MQ=255) gCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTCCACcagg > 7:222026/1‑149 (MQ=255) cTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTCCACcaggc < 3:182472/149‑1 (MQ=255) ggCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTCCACcaggcag < 8:109904/148‑1 (MQ=255) gCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTCCACCAGGCAGgt > 2:156546/1‑149 (MQ=255) | GTTGCGCCTCGATCTGGCGCGCCTCTTCGTGCAGGGCGGCCAGCTCTTCTTCCGAAAGCGGTACGTTGCGGTCCAGTTGCTCGCGCAAGCTGTTCAGGCGCTCTTGCAATTCGCGGGCAGGCATTGGCTATTCTCCATCAATGGCTTGGCAAGCCATGGACCTCTGCGACGTGGCAAAGGTTCT‑GGCCTGTCTTCAGGGTAATCTACCTGCTGGCGATTTGCATGATCCGCGTCAAGACGGCTGTATCAGGGTTTTTCACCCTTGCGCCGGCGCTGGGCGATGTCCACCAGGCAGGT > NC_002947/2468113‑2468409 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |