| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,070,583 | T→C | 5.2% | K526E (AAG→GAG) | mdtB ← | multidrug transporter membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,070,583 | 0 | T | C | 5.2% | 230.1 / 2.1 | 76 | K526E (AAG→GAG) | mdtB | multidrug transporter membrane protein |
| Reads supporting (aligned to +/- strand): ref base T (40/32); new base C (2/2); total (42/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
GCGAACGAGGTGGACTGCGGCGCTTCGGAAATACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCGTCAGGGTCAGGGACAC > NC_002947/4070435‑4070730 | gCGAACGAGGTGGACTGCGGCGCTTCGGAAATACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCtt < 4:311767/149‑1 (MQ=255) gAAGGAGGTGGACTGCGGAGCTTCGGAAATAGCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCGCTTGGGCACGACCATGTACAGGAACACCGTGTGCTG‑TAGGCTGGCCACCGCCACCAGCAAGGTCAGGTTCTGATGCttta < 4:314088/149‑3 (MQ=255) gAACGAGGTGGACTGCGGCGCTTCGGAAATACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCtt > 1:41969/1‑147 (MQ=255) aaCGAGGTGGACTGCGGCGCTTCGGAAATACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCACTCAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGa < 1:69112/149‑1 (MQ=255) ggTGGACTGCGGCGCTTCGGAAATACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCGTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCAcc > 3:64255/1‑148 (MQ=255) cggcgCTTCGGAAATACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAggg < 1:164540/149‑1 (MQ=255) cggcgCTTCGGAAATACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAgg < 2:110424/148‑1 (MQ=255) aaaTACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAg < 4:64255/149‑1 (MQ=255) aTACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTCGAGCACCCACTGCAGGGCACTGCCGTAGTg > 5:21242/1‑149 (MQ=255) aTACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTCGAGCACCCACTGCAGGGCACTGCCGTAGTg > 5:25980/1‑149 (MQ=255) cccTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTg > 2:43997/1‑149 (MQ=255) ccTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTg > 8:132569/1‑148 (MQ=255) cTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGa < 1:193804/149‑1 (MQ=255) gATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGa < 1:188727/146‑1 (MQ=255) gATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGa > 2:188727/1‑146 (MQ=255) gATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGa > 2:193804/1‑146 (MQ=255) cccGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGt > 3:222786/1‑149 (MQ=255) cTGCACAGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAgg < 7:96201/149‑1 (MQ=255) cGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCAc > 4:260668/1‑149 (MQ=255) cGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCAc > 8:259526/1‑149 (MQ=255) ggAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTg > 8:287348/1‑149 (MQ=255) gaagCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGt > 4:66449/1‑128 (MQ=255) gaagCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGt < 3:66449/128‑1 (MQ=255) cTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCTCCACCAGCAAGGTCAGCGGCTGATGCTTGAGAACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGTCGCGGTAg > 8:162091/1‑148 (MQ=255) ggCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCg < 3:260668/149‑1 (MQ=255) ggCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGAGGTAGAAgag > 4:86718/1‑147 (MQ=255) ggCACGACCATGTACAGGAACACAGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCg < 2:41969/149‑1 (MQ=255) cACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCa > 5:291912/1‑130 (MQ=255) cACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCa < 6:291912/130‑1 (MQ=255) cACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGc < 7:132569/149‑1 (MQ=255) aCGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGcc < 7:259526/149‑1 (MQ=255) aCGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGcc > 1:245487/1‑149 (MQ=255) ccATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGt > 5:327941/1‑149 (MQ=255) aTGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttc > 7:43259/1‑149 (MQ=255) tGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttct < 1:43997/149‑1 (MQ=255) tGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCAGTAGTGCTTGATCAGCCAGTCGATCCAGGCGCCACTTGCGCGGTAGAAGCGGCCTTGttct < 1:204399/149‑1 (MQ=255) gTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttctt > 5:266799/1‑149 (MQ=255) tACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGcgcg < 1:127847/128‑1 (MQ=255) tACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGcgcg > 2:127847/1‑128 (MQ=255) cAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttcttctt < 7:287348/149‑1 (MQ=255) aGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttcttcttc > 7:226831/1‑149 (MQ=255) aGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttcttcttc > 6:11717/1‑149 (MQ=255) aGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttcttcttc > 5:34323/1‑149 (MQ=255) gAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCt > 4:8052/1‑149 (MQ=255) gAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCt > 3:125915/1‑149 (MQ=255) acacCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTg < 4:222786/149‑1 (MQ=255) cacCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGt < 5:233779/98‑1 (MQ=255) cacCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGt > 6:233779/1‑98 (MQ=255) tGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTcg > 3:198152/1‑149 (MQ=255) tGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTcg < 4:125915/149‑1 (MQ=255) gCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCgcgc < 1:48635/149‑1 (MQ=255) cAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCtt > 3:313332/1‑147 (MQ=255) cAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGa < 3:8052/149‑1 (MQ=255) cAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGa < 6:266799/149‑1 (MQ=255) cAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTCGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGa < 6:21242/149‑1 (MQ=255) cAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTCGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGa < 6:25980/149‑1 (MQ=255) gcttggcaccgccaccAGCAAGGTCAGCGGCTGATGCTTGAGCACCGACTGCAGGGCACTGCCGTAGTGCTGGAGCAGCCAGTCGATCCAGGCGCGACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCa < 3:136667/143‑1 (MQ=255) gCTCGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGCTCAGCCAGTCGATCCAGGCGCCACAGGCCCGGTAGAAGCGGCCTTCTTCTTCTTCCTTGGGCTCGCGCTTGAg > 4:136667/1‑147 (MQ=255) tGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGa > 2:137167/1‑149 (MQ=255) gccaccgccaccAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGAc < 1:137167/148‑1 (MQ=255) ccaccgccaccAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGAcgc > 4:276390/1‑149 (MQ=255) gccaccAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGca < 6:327941/149‑1 (MQ=255) ccaccaGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGcac < 8:226831/149‑1 (MQ=255) caccaGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGcaca > 6:8461/1‑149 (MQ=255) gCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACatcatc < 8:43259/149‑1 (MQ=255) cAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGCAGGGGCCTTGTTCTTCTTCCTTGGCCTAGCGCTTGAGCAGAAGCGCGCACATCATCg > 7:236101/1‑149 (MQ=255) aGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTg > 2:217657/1‑95 (MQ=255) aGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCgtcag < 5:11717/149‑1 (MQ=255) gCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttcttctt < 8:69203/102‑1 (MQ=255) gCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGttcttctt > 7:69203/1‑102 (MQ=255) gCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCgtcagg > 7:195962/1‑149 (MQ=255) gCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCgtcagg > 8:260295/1‑149 (MQ=255) gATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCgtcagggtcagg > 5:81165/1‑149 (MQ=255) aTGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCgtcagggtcagg > 2:49113/1‑148 (MQ=255) gCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCGTCAGGGTCAGGGa < 6:34323/148‑1 (MQ=255) gCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCGTCAGGGTCAGGGa > 4:263513/1‑148 (MQ=255) cTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACgcgcgc < 5:315242/122‑1 (MQ=255) cTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACgcgcgc > 6:315242/1‑122 (MQ=255) cTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCCGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCGTCAGGGTCAGGGaca > 7:7455/1‑149 (MQ=255) ttGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCGTCAGGGTCAGGGacac > 7:176785/1‑149 (MQ=255) | GCGAACGAGGTGGACTGCGGCGCTTCGGAAATACCCTGGATCACCCCGGTATCCTGCACCGGGAAGAAGCCCTTGGGCACGACCATGTACAGGAACACCGTGAGCAC‑CAGGCTGGCCACCGCCACCAGCAAGGTCAGCGGCTGATGCTTGAGCACCCACTGCAGGGCACTGCCGTAGTGCTGGATCAGCCAGTCGATCCAGGCGCCACTGGCGCGGTAGAAGCGGCCTTGTTCTTCTTCCTTGGGCTCGCGCTTGAGCAGACGCGCGCACATCATCGGCGTCAGGGTCAGGGACAC > NC_002947/4070435‑4070730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |