Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_002947	336,125	+T	coding (210/237 nt)	PP_0278 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	336,124	1	.	T	100.0%	247.4 / NA	74	D70V (GAT→GTT)	PP_0278	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base T (35/39);  total (35/39)

GTTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGA  >  NC_002947/335976‑336263                                                                                                                                                      |                                                                                                                                             gTTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGa                                                                                                                                               <  7:284585/149‑1 (MQ=255)      cccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑ttacc                                                                                                                                         >  1:109395/1‑145 (MQ=255)       ccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑ttacct                                                                                                                                        >  2:381235/1‑144 (MQ=255)       ccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑ttacct                                                                                                                                        >  5:144331/1‑144 (MQ=255)       ccATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑ttacct                                                                                                                                        >  2:123393/1‑144 (MQ=255)             cTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGa                                                                                                                                   >  2:83617/1‑149 (MQ=255)                 aTCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATg                                                                                                                               >  7:109608/1‑149 (MQ=255)                  tctcCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATgg                                                                                                                              >  8:25548/1‑149 (MQ=255)                    tcCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGc                                                                                                                             >  5:9854/1‑148 (MQ=255)                      cTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGcc                                                                                                                            >  5:286160/1‑147 (MQ=255)                       tACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGCCCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACAAGGCCAAg                                                                                                                         >  5:353698/1‑149 (MQ=255)                       tACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAg                                                                                                                         >  1:281227/1‑149 (MQ=255)                       tACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAg                                                                                                                         >  5:125837/1‑149 (MQ=255)                         cgcgTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGTGGCAGCCGATTACCTGTGCGACATGGCCAAg                                                                                                                         <  1:335853/147‑1 (MQ=255)                         cgcgTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAg                                                                                                                         <  3:76524/147‑1 (MQ=255)                              agagCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCtga                                                                                                                  >  6:149384/1‑149 (MQ=255)                                agCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCGACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCtgat                                                                                                                 >  1:294844/1‑148 (MQ=255)                                 gCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGTCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATCGCCAAGGCGCtgatga                                                                                                               <  4:165377/149‑1 (MQ=255)                                         tCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATc                                                                                                       <  4:303790/149‑1 (MQ=255)                                           cccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCTGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCga                                                                                                     >  6:380653/1‑149 (MQ=255)                                           cccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCga                                                                                                     <  6:9854/149‑1 (MQ=255)                                            ccGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCgag                                                                                                    <  2:281227/149‑1 (MQ=255)                                               tCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑c                                                                                                <  1:141422/149‑1 (MQ=255)                                                 gACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGc                                                                                              >  1:248946/1‑149 (MQ=255)                                                    gcgGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCaa                                                                                           <  4:250002/149‑1 (MQ=255)                                                      ggCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAg                                                                                                                         <  5:198447/118‑1 (MQ=255)                                                      ggCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAg                                                                                                                         >  6:198447/1‑118 (MQ=255)                                                      ggCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAgg                                                                                         <  2:248946/149‑1 (MQ=255)                                                      ggCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAgg                                                                                         <  2:294844/149‑1 (MQ=255)                                                        ccTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGt                                                                                       <  5:149384/149‑1 (MQ=255)                                                         cTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGt                                                                                       >  7:436/1‑148 (MQ=255)                                                             gAGCATGTCTCGATCCTGATGGGCTACATCCACCACCAGGTGCGCCAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCAGATTACATGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGgc                                                                                  >  7:7213/1‑149 (MQ=255)                                                             gAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGgc                                                                                  <  7:9458/149‑1 (MQ=255)                                                              aGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGgcg                                                                                 >  5:171460/1‑149 (MQ=255)                                                                cATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCa                                                                               <  8:109608/149‑1 (MQ=255)                                                                   gTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACATGTGCCACATGGCCAAGGCGCTGATGACCGATTTCGAGAA‑CGCCAAGGGTAAggggattaa                                                                            >  8:257060/1‑142 (MQ=255)                                                                    tctcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAg                                                                           <  4:141582/149‑1 (MQ=255)                                                                    tctcGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAg                                                                           <  2:109395/149‑1 (MQ=255)                                                                      acGATCCTGTTGTGCTACCTCAAGCTCCTGGTGCGCGAGTGCGATATCGAGGACGACCATAAATTCCTGGGGGCATCCGATTACCTTTGCGACATGGCCAAGGCGCTGATTAACGATATCGAGAT‑CGCCAAGGTTACGGCGCATTAgg                                                                          <  4:305784/147‑1 (MQ=255)                                                                        gaaccTGATGGGCTAAATCTAGCACCGTGTGCGCGACGGCGATATGGAGGCCGAACATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAgg                                                                          <  7:257060/143‑1 (MQ=255)                                                                        gATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCa                                                                        <  6:125837/148‑1 (MQ=255)                                                                        gATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCAt                                                                       >  4:301422/1‑149 (MQ=255)                                                                          tCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGTGCATTAGGCAtt                                                                      >  2:274000/1‑148 (MQ=255)                                                                             tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGc                                                                         >  6:231669/1‑142 (MQ=255)                                                                             tGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGc                                                                         <  5:231669/142‑1 (MQ=255)                                                                               aTGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGAcg                                                                  <  6:144331/147‑1 (MQ=255)                                                                                    cTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAt                                                           >  5:226121/1‑149 (MQ=255)                                                                                      aCATCACGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGTGCATCCGATTAACTGTGCGACAAGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCTAGCGTAAGGCGCATTAGGCATTGACGCGGTCAttt                                                         >  5:269618/1‑149 (MQ=255)                                                                                       cATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAttt                                                         <  1:83617/148‑1 (MQ=255)                                                                                        aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAg                                                                                    <  3:155388/120‑1 (MQ=255)                                                                                        aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAg                                                                                    >  4:155388/1‑120 (MQ=255)                                                                                        aTCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTtgt                                                       >  5:271507/1‑149 (MQ=255)                                                                                         tCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGAGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTTCCGCGGTCATTtgtg                                                      >  7:189044/1‑149 (MQ=255)                                                                                          cAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAt                                                           >  5:10668/1‑143 (MQ=255)                                                                                          cAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCAt                                                           <  6:10668/143‑1 (MQ=255)                                                                                           aaGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTgg                                                     >  7:37511/1‑148 (MQ=255)                                                                                           aaGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTgg                                                     <  8:37511/148‑1 (MQ=255)                                                                                            aGCACCTGGTGCTCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGATGCGCCAAGGGTAAGGTGCATTAGGCATTGACGCGGTCATTTGTggg                                                    <  1:274000/149‑1 (MQ=255)                                                                                               aCCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCg                                                >  2:271738/1‑149 (MQ=255)                                                                                                 cTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGc                                              >  6:245129/1‑149 (MQ=255)                                                                                                       cgcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGNGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGc                                         <  1:123393/148‑1 (MQ=255)                                                                                                        gcgAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATTGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGt                                       <  6:286160/149‑1 (MQ=255)                                                                                                             ggCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTcgcg                                   >  1:182944/1‑148 (MQ=255)                                                                                                              gCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGaa                                 <  6:271507/149‑1 (MQ=255)                                                                                                              gCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGaa                                 <  1:381235/149‑1 (MQ=255)                                                                                                               cGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAAt                                <  7:25548/149‑1 (MQ=255)                                                                                                                     ggaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCaa                                                                                           <  7:153300/84‑1 (MQ=255)                                                                                                                     ggaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCaa                                                                                           >  8:153300/1‑84 (MQ=255)                                                                                                                     ggaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGc                                         <  3:307905/134‑1 (MQ=255)                                                                                                                     ggaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGAGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGc                                         >  4:307905/1‑134 (MQ=255)                                                                                                                      gaggaCGACCATAAATTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGc                         <  3:301422/149‑1 (MQ=255)                                                                                                                                aTAAATTCCTGGGGGCAGCCGATTACATGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGccc               >  5:16718/1‑149 (MQ=255)                                                                                                                                    aTTCCTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGc           >  1:375366/1‑149 (MQ=255)                                                                                                                                        cTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCAt                                                                              >  2:334275/1‑78 (MQ=255)                                                                                                                                        cTGGGGGCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCAt                                                                              <  1:334275/78‑1 (MQ=255)                                                                                                                                           ggggCAGCCGATTACGTGTGCGACTTGGCAATGGCGCTGATTAACTATATCGAGAT‑CGCCAAGGGTATGGCGAATTAGGCATTTACGCGGTAATTTGTGGTAGCGGCATTGGGTCGCTAATGGGGTGCAAAGCAGCCCCGGCGATTTCa    <  2:375366/149‑1 (MQ=255)                                                                                                                                             ggCAGCCTATTACCTGTGCTACATGGCCAAGGCGCTGATTAACGATATCGATAT‑CGCCAAGGGTACGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCaga  <  6:16718/149‑1 (MQ=38)                                                                                                                                             ggCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCaga  <  7:267373/149‑1 (MQ=255)                                                                                                                                             ggCAGCCGATTACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAACAGCCCCGGCGATTTCaga  <  5:380653/149‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                             GTTAACCCATCCCTCAATCTCCTACGCGTAGAGCCCGGCGTCCCCGTCGACGCGGCCTACGAGCATGTCTCGATCCTGATGGGCTACATCAAGCACCTGGTGCGCGAGGGCGATATGGAGGACGACCATAAATTCCTGGGGGCAGCCGA‑TACCTGTGCGACATGGCCAAGGCGCTGATGAACGATATCGAGAT‑CGCCAAGGGTAAGGCGCATTAGGCATTGACGCGGTCATTTGTGGGAGCGGCCTTGCGTCGCGAATGGGCTGCAAAGCAGCCCCGGCGATTTCAGA  >  NC_002947/335976‑336263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑