New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1419549	15 (0.230)	21 (0.320)	15/278	4.6	49.0%	intergenic (‑38/+98)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
	?	NC_002947	= 1419636	29 (0.450)					intergenic (‑125/+11)	PP_1242/PP_1244	hypothetical protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.

CCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGG‑C‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAA  >  NC_002947/1419414‑1419694                                                                                                                                         |                                                                                                                                                   ccGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGc                                                                                                                                        <  3:171335/148‑1 (MQ=255)  cGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGCCTGTGGTGGGTTCTGGTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCAc                                                                                                                                      >  5:264451/1‑149 (MQ=255)             cGGAACAGCGGGTGTGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTGGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATCCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTccc                                                                                                                            <  1:74118/148‑1 (MQ=255)                aaCAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                        <  1:91960/149‑1 (MQ=255)                             tgttgtTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACtgt                                                                                                                 <  6:176879/143‑1 (MQ=255)                             tgttgtTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACtgt                                                                                                                 >  5:176879/1‑143 (MQ=255)                               ttgttTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGTTGGGCATTGTTTTGTTTCAATGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCg                                                                                                         >  4:122753/1‑149 (MQ=39)                                 gttTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGt                                                                                                        <  2:193244/148‑1 (MQ=255)                                      cGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                        <  7:178753/127‑1 (MQ=255)                                      cGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                        >  8:178753/1‑127 (MQ=255)                                            ggTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGTCtgtg                                                                                              <  2:292128/147‑1 (MQ=255)                                            ggTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTgtggt                                                                                            >  8:302039/1‑149 (MQ=255)                                               aGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGc                                                                                                                                >  3:301335/1‑110 (MQ=255)                                               aGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGc                                                                                                                                <  4:301335/110‑1 (MQ=255)                                                gAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGAc                                                                                         <  2:76576/148‑1 (MQ=255)                                                gAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGAc                                                                                         >  1:76576/1‑148 (MQ=255)                                                   gCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCAGCTCCCACAGGTACTGTTCAGTGCGTTGAGGCTGGGGTGCCCCtg                                                                                     >  3:242570/1‑149 (MQ=38)                                                      ggTGTTGCCGACTGTGGTGGGTTCTGTTGTTTTGTCGGTGGGCATGGTTTTGTTTCCCTGGATTCTGGGTTTCCTTGGCTGGCC‑TCTTCTCGGGCACGCCCTCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTgg                                                                                  <  8:215273/149‑1 (MQ=255)                                                              cGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTAGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                        >  8:49280/1‑103 (MQ=255)                                                              cGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTAGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                        <  7:49280/103‑1 (MQ=255)                                                                aCTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGt                                                                        <  7:302039/149‑1 (MQ=255)                                                                                                  ttgttttgttTCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGGAGTGCGAGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGGAAGgt                                      >  3:113557/1‑149 (MQ=37)                                                                                                          tttCCCTGTATTCGGGGTTGCGTGGGCTGGCC‑TGTGCGCGGGCACGCCGGCTCCCACCGTTAGTGTGCTGTGGGTGACGGCTGTGGTGACCCTGTGGGTGGGGGGGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAg                                 <  2:214924/146‑1 (MQ=255)                                                                                                          tttCCCTGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAg                                 >  1:214924/1‑146 (MQ=255)                                                                                                                tGGATTCTGGGTTGCCTGGGCTGGCC‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTgg                        >  8:258029/1‑149 (MQ=255)                                                                                                                     tcggggTGGCCTGGGCGGG‑CATCTTCTCGGGCACGCCCGCTCCCACCGGTCCTGTGCAGTGCGTGACGGCGGTGGTGACCCTGTGGGCGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTaa                    <  4:242570/145‑1 (MQ=255)                                                                                                                                      ggcc‑tctTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCaa  <  7:258029/146‑1 (MQ=255)                                                                                                                                         |                                                                                                                                                   CCGGGTTCGATGCGGAACAGCGGGTGAGTGTTGTTTTCGCCTTGGTAGAAGCAGGTCTTGCCGACTGTGGTGGGTTCTGTTGTGTTGTCGGTGGGCATTGTTTTGTTTCCCTGGATTCTGGGTTGCCTGGGCTGG‑C‑TCTTCGCGGGCACGCCCGCTCCCACAGGTACTGTGCAGTGCGTGACGGCTGTGGTGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCTGACCTGCTAATGCAAGGTGTGAGGCTCTGTGGGTAAATGCGACCGCATCTGCAA  >  NC_002947/1419414‑1419694

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.