| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 3,845,705 | +G | intergenic (‑72/+26) | PP_3394 ← / ← PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,845,703 | 1 | . | G | 92.4% | 207.3 / 10.9 | 66 | intergenic (‑70/+28) | PP_3394/PP_3395 | 3‑hydroxy‑3‑methylglutaryl‑CoA lyase/LysR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base . (0/5); new base G (33/28); total (33/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.31e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
GGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GC‑G‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCAC > NC_002947/3845566‑3845837 | ggCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATcc < 2:252357/148‑1 (MQ=255) gCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCAt > 8:251393/1‑149 (MQ=255) aTCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGt > 1:91245/1‑147 (MQ=255) aTCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTc < 7:115784/148‑1 (MQ=255) tCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAg < 2:114707/149‑1 (MQ=255) aCTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGcc < 5:54915/149‑1 (MQ=255) cTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCa < 6:237598/149‑1 (MQ=255) ttGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCAc > 3:77153/1‑149 (MQ=255) cAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGa < 4:77153/148‑1 (MQ=255) ggCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCCCGATgg > 4:194641/1‑149 (MQ=255) ggCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATgg < 8:160587/149‑1 (MQ=255) ggCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATgg < 5:23558/149‑1 (MQ=255) tctctGCTAGCCATCGCGCATGCCGACTTCATTGATTGTTATTGTTGTGATCGGGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTTTATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GC‑GTGCTGATCAATCGTCAGCCACGATGGa < 4:301827/148‑1 (MQ=255) gCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGa < 2:189852/149‑1 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGATCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTAAGCCACGATGGAt > 5:116488/1‑148 (MQ=255) tctGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATCGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGAt > 1:12567/1‑148 (MQ=255) tGCAAGCCATCTCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTGGCTGACGATGGATc < 8:111328/147‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGAt < 7:279401/146‑1 (MQ=255) tGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGAt > 8:279401/1‑146 (MQ=255) gCAAGCCATCGCGCAGGCCGTCTTCATTTATTGTTATTGTTGTCATAGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAGTACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACg < 1:64215/140‑1 (MQ=255) gCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACg > 2:64215/1‑139 (MQ=255) cAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCTTCAGCAACTATGGATAAGcc > 6:297292/1‑149 (MQ=255) cAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTGGCTGACGATGGATCa < 1:364459/146‑1 (MQ=255) cAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGcc > 5:109300/1‑149 (MQ=255) cAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGc < 8:328922/148‑1 (MQ=255) aaGCCATCGCGCAGGCCGACTTCATTGATTGTTATCGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGccc < 2:12567/149‑1 (MQ=255) cgcAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGGGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGc < 5:297292/149‑1 (MQ=255) gCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGAt > 4:24793/1‑108 (MQ=255) gCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGAt < 3:24793/108‑1 (MQ=255) gCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATgg > 8:315836/1‑127 (MQ=255) gCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATgg < 7:315836/127‑1 (MQ=255) aCTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGa < 8:315931/120‑1 (MQ=255) aCTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGa > 7:315931/1‑120 (MQ=255) cATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTc < 1:350918/108‑1 (MQ=255) cATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTc > 2:346386/1‑108 (MQ=255) cATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTc > 2:350918/1‑108 (MQ=255) cATTGATTGTTAATGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTc < 1:346386/108‑1 (MQ=255) attgattgTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTg > 7:376243/1‑134 (MQ=255) attgttattgttGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCGAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑Cgcag > 1:298943/1‑148 (MQ=255) gttgtCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAggtgg > 4:58006/1‑149 (MQ=255) tctctGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCgcc > 3:346965/1‑147 (MQ=255) tctgtctgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCgcc < 6:393484/145‑1 (MQ=255) tctgtctgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCgcc > 5:393484/1‑145 (MQ=255) tgAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑TCC‑GCGG‑GCTGATCCATCGTCAGCCAGGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCgccgagccga > 1:110118/1‑147 (MQ=255) gAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGc > 2:97916/1‑149 (MQ=255) aaGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATc > 3:368799/1‑62 (MQ=255) aaGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATc < 4:368799/62‑1 (MQ=255) cAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGACCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAAAAGGTGGTCAAGCAGGCGCCGAGCCGACAGCCAGAGCGAGTGc > 7:148105/1‑149 (MQ=255) gagtAAGAGCTGGATGACGGGCATAAAAC‑CCGTGTTGG‑G‑GG‑G‑GCTGATCCATCGTCTGCCACTATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGcc < 2:136686/145‑1 (MQ=255) gACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCg > 1:235318/1‑149 (MQ=255) gACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCg < 1:97916/149‑1 (MQ=255) aCTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCAGTGTAGACCAACCGGGTCACCAGCCGGCGCCGACCCGACAGCGAGCGCGTGTGc > 1:136686/1‑149 (MQ=255) aCTAAGAGCGGGTTGACGGGCAGAAAAG‑ACGTGTT‑G‑CGGG‑G‑GCTGATCCAGCGTCAGCCACGATGTATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCgg < 2:97898/149‑1 (MQ=255) cTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCAt > 3:144227/1‑149 (MQ=255) gATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGc < 6:109300/148‑1 (MQ=255) aCGGGCATAAACG‑ACGTGTT‑TCC‑GG‑G‑GCTGATCCATCGTCAGCCACTATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGAt < 7:251393/148‑1 (MQ=255) aCGGGCATAAAAG‑AGGTGTT‑T‑CGGG‑G‑GTTGATCCTTGGTCAGCCAGGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACTGCGAGAGCGTGTGCCGGTCGCGCATGCAGATg < 4:144227/149‑1 (MQ=255) gggCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAg > 5:331549/1‑89 (MQ=255) gggCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAg < 6:331549/89‑1 (MQ=255) ggCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGAc > 7:105462/1‑148 (MQ=255) gCAGAAAAG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACg > 8:199016/1‑148 (MQ=255) aaaaG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAAtt > 6:160233/1‑148 (MQ=255) aaaaG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGACACCGTGTGCCGGTGGCGCCTg > 3:400267/1‑135 (MQ=255) aatccccGTGTT‑T‑C‑GCGG‑GCGGACCCATCTGCAGCCCCGATGTATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTc < 4:254437/143‑1 (MQ=255) aG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCAc > 5:187603/1‑148 (MQ=255) aG‑ACGTGTT‑T‑C‑GCGG‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCAc < 6:187603/148‑1 (MQ=255) | GGCATGATCACTTGCAGGCTCTGCAAGCCATCGCGCAGGCCGACTTCATTGATTGTTATTGTTGTCATCGCGGTCTCTCTGTCTGAAGCGTTGCGCCAGACTAAGAGCTGGATGACGGGCAGAAAAG‑ACGTGTT‑T‑C‑GC‑G‑GCTGATCCATCGTCAGCCACGATGGATCAGCCCGCGCCCTGCCAGGCCGGTGCA‑CGCAG‑‑CAACAGGTGGTCAAGCAGGCGCCGAGCCGACAGCGAGAGCGTGTGCCGGTCGCGCATGCAGATGACGAATTCAC > NC_002947/3845566‑3845837 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |