| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 5,674,751 | +G | intergenic (+113/+27) | rhlE‑II → / ← yceI | ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,674,750 | 1 | . | G | 97.9% | 316.8 / ‑0.6 | 94 | intergenic (+112/+28) | rhlE‑II/yceI | ATP‑dependent RNA helicase/polyisoprene‑binding acidic stress response factor |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base G (51/41); total (51/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGTGAGCGCCCAGCGCTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑G‑CG‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTGAAGCCA > NC_002947/5674602‑5674892 | cgGGGAGCGCCCAGCGCTGCTGACCCGCAAGGGCTGATAGACGGACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc < 4:286203/149‑1 (MQ=255) tGAGCGCCCAGCGCTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑ggc < 2:31261/149‑3 (MQ=255) gcgcTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGtt > 6:286871/1‑149 (MQ=255) gctgctGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGtttt < 3:306496/149‑1 (MQ=255) ctgACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCg < 8:224172/140‑1 (MQ=255) ctgACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCg > 7:224172/1‑140 (MQ=255) ctgACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGc < 1:113387/149‑1 (MQ=255) gACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTg > 6:300039/1‑149 (MQ=255) gACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAACGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTg < 5:245879/149‑1 (MQ=255) aCCCGCAAGGGCTGATTGAAGTACCGAGGGGGCTTCTTCGCAGCCCTATCACGACACAAGGGCGCTCCTGCAGAGATTTTCTTGATCTCTACAGGAGCGTCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTGAGc < 3:307217/146‑1 (MQ=25) cggctaGGGCTGATAGTAGTAGCGAGGGGGCTGGTTCGCAGCCCTATCACGACACAAGTCCGCTCCTGCAGAGAATTTCTTGATCTCTACTGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑g < 8:297920/121‑1 (MQ=37) ccGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTgg > 1:159117/1‑147 (MQ=255) ccGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTgg > 1:89435/1‑147 (MQ=255) ccGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGAGGCCTTGTCTCGTGATAGGGCCCCAAAgc‑g > 7:297920/1‑126 (MQ=255) ccGCAAGGGCTGATAGAAGTACCGAGGGGGCTCCTTCGCAGCCCTATCACGACAAAAGGCCGCTCCTGAAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGAGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCAAGGTTTTCAGCTGGc > 5:18641/1‑148 (MQ=255) cGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTgg > 2:297388/1‑146 (MQ=255) gCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAg > 3:161969/1‑148 (MQ=255) gCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑ggcc < 3:44547/121‑4 (MQ=255) gCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAgc‑ggcc > 4:44547/1‑118 (MQ=255) gCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTAc < 4:161969/149‑1 (MQ=255) cTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACt < 6:425104/149‑1 (MQ=255) aTAGAAGTACCGAGGGGGCGGCATCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACtt < 8:212103/147‑1 (MQ=37) aaGTACCGAGGGGGCTGCTTCGCAGGCCTATGACGACACATGGCCTCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑GTCC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt < 6:418184/149‑1 (MQ=38) aaGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt > 5:65601/1‑149 (MQ=255) aaGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCtt > 5:234652/1‑149 (MQ=255) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCacac > 7:269331/1‑149 (MQ=255) ccGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCATTGTGTCGTGATAGTGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCacac > 2:278221/1‑149 (MQ=38) cGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACAcc > 1:382253/1‑149 (MQ=255) gatagggCTGCGAAGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCt > 8:343598/5‑149 (MQ=37) gggggCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACATGAGCGGACTTGTGTAGTGATAGGGCCGCAAAGCGG‑CG‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTc < 1:297388/149‑1 (MQ=38) ctgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGacac < 8:269331/149‑1 (MQ=255) tgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACt > 2:279908/1‑149 (MQ=255) tgctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCAGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACt > 3:243334/1‑149 (MQ=255) gctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCg < 1:29990/143‑1 (MQ=255) gctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCg > 2:29990/1‑143 (MQ=255) ctTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGa < 7:375991/149‑1 (MQ=255) tCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGata > 6:89831/1‑149 (MQ=255) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat < 3:400914/142‑1 (MQ=255) cccTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGat > 4:400914/1‑142 (MQ=255) tATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGa < 6:351895/132‑1 (MQ=255) tATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGa > 5:351895/1‑132 (MQ=255) cACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt > 3:99264/1‑126 (MQ=255) cACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCtt < 4:99264/126‑1 (MQ=255) aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGa > 5:110345/1‑128 (MQ=255) aCGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CA‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGa < 6:110345/128‑1 (MQ=255) aaGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTAATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCg > 2:258406/1‑148 (MQ=255) aGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGaa < 6:386389/149‑1 (MQ=255) ggCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAg < 6:65601/149‑1 (MQ=255) ggCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCATTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACTTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAg < 1:278221/149‑1 (MQ=255) gCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGc < 5:300039/149‑1 (MQ=255) tGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt > 2:202234/1‑98 (MQ=255) tGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCt < 1:202234/98‑1 (MQ=255) cAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCAGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCgg < 4:243334/148‑1 (MQ=255) gagaATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGcc < 2:147412/149‑1 (MQ=255) aTTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTAAGCTGGCAGAAATTACTTCTGc > 3:187631/1‑89 (MQ=25) tCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATg > 5:422219/1‑149 (MQ=255) gATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGt > 4:259584/1‑117 (MQ=255) gATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGt < 3:259584/117‑1 (MQ=255) gATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCg < 6:422219/148‑1 (MQ=255) gATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCAGGCAGAAAATACTTCAGCTTCAAACCTTCGACACAGATATCCAGGTCCAGGGTCTGc > 4:372603/1‑121 (MQ=37) gATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑G‑GGCCCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGc < 3:372603/121‑1 (MQ=255) tctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCTTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc > 8:272980/1‑149 (MQ=255) tctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc > 3:119436/1‑149 (MQ=255) tctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc > 4:350959/1‑149 (MQ=255) ctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCtt < 8:15801/135‑1 (MQ=255) ctACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCtt > 7:15801/1‑135 (MQ=255) tACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTc < 2:382253/147‑1 (MQ=255) tACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgt > 4:136230/1‑149 (MQ=255) aCAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGACGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt < 6:234652/149‑1 (MQ=255) ctgtaGCGGCCTTTTTTAGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCTTTTTTCAGCTTGCAGAAATTACTTCTGCTTCACACCTTCGAGACTGATATCCAGGTCCAGGGTCTTCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttc < 6:18641/145‑1 (MQ=255) cAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACCGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgtt > 2:8983/1‑148 (MQ=255) aGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCGCCCGGGCCttt < 7:226398/132‑1 (MQ=255) aGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCGCCCGGGCCttt > 8:226398/1‑132 (MQ=255) gAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCTTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCTCCCGGGCCTTTGATGCCGAAGTCgttcagg < 7:272980/149‑1 (MQ=255) gAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc < 4:256394/71‑1 (MQ=25) gAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGc > 3:256394/1‑71 (MQ=25) gAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcagg < 5:286871/149‑1 (MQ=255) ggCCTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggttca < 4:119436/149‑1 (MQ=255) cTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 3:200019/1‑149 (MQ=255) cTTGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCg > 5:19444/1‑149 (MQ=255) ttGTGTCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgt > 8:200740/1‑149 (MQ=255) gtgtCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtgg > 7:347201/1‑149 (MQ=255) gtCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg > 7:334265/1‑149 (MQ=255) tCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtgg > 4:19804/1‑149 (MQ=255) tCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtgg > 2:206674/1‑149 (MQ=255) tCGTGATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCgtggtg < 7:343598/148‑1 (MQ=255) gATAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGc > 1:403647/1‑149 (MQ=255) aTAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGcc < 4:36158/118‑1 (MQ=255) aTAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGcc > 3:36158/1‑118 (MQ=255) tAGGGCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGt > 6:30842/1‑149 (MQ=255) gggCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGtt < 5:89831/148‑1 (MQ=255) ggCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGt > 5:95495/1‑93 (MQ=255) ggCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGt < 6:95495/93‑1 (MQ=255) ggCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTg > 3:137132/1‑148 (MQ=255) gCCGCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTGaa < 3:258298/149‑1 (MQ=255) gCAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTGAAGc > 5:154568/1‑148 (MQ=255) cAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggttcag < 7:389804/127‑1 (MQ=255) cAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCgttcaggttcag > 8:389804/1‑127 (MQ=255) cAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTGAAGc > 3:401918/1‑147 (MQ=255) cAAAGCGG‑CC‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTGAAGCCa < 4:401918/149‑1 (MQ=255) | CGGTGAGCGCCCAGCGCTGCTGACCCGCAAGGGCTGATAGAAGTACCGAGGGGGCTGCTTCGCAGCCCTATCACGACACAAGGCCGCTCCTGCAGAGAATTTCTTGATCTCTACAGGAGCGGCCTTGTGTCGTGATAGGGCCGCAAAGC‑G‑CG‑CCCTCGGTTTTCAGCTGGCAGAAATTACTTCTGCTTCACACCTTCGACACTGATATCCAGGTCCAGGGTCTGCGAAGTAGCACCCGGGCCTTTGATGCCGAAGTCGTTCAGGTTCAGCGTGGTGGTGGCGTTGAAGCCA > NC_002947/5674602‑5674892 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |