Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	6098313	6098461	149	30 [29]	[28] 30	PP_5350	RpiR family transcriptional regulator

TAGATCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTGGGGGTC  >  NC_002947/6098388‑6098605                                                                           |                                                                                                                                                tAGATCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGa                                                                       >  5:22742/1‑149 (MQ=255)  aGATCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCCCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGAc                                                                      >  4:330759/1‑149 (MQ=255)    aTCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCtctc                                                                                                                    >  3:116140/1‑101 (MQ=255)    aTCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCtctc                                                                                                                    <  4:116140/101‑1 (MQ=255)         ggTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTggg                                                                  <  6:22742/146‑1 (MQ=255)               ttCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATacaca                                                         >  1:331296/1‑149 (MQ=255)                 cATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTg                                                                    >  1:273700/1‑136 (MQ=255)                 cATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTg                                                                    <  2:273700/136‑1 (MQ=255)                   tGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGAGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGc                                                     >  1:51930/1‑149 (MQ=255)                         tCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTggg                                                                  <  8:381724/130‑1 (MQ=255)                         tCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTggg                                                                  <  8:276899/130‑1 (MQ=255)                         tCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTggg                                                                  >  7:381724/1‑130 (MQ=255)                         tCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTggg                                                                  >  7:276899/1‑130 (MQ=255)                              cGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGc                                             <  1:260548/146‑1 (MQ=255)                              cGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGc                                             >  2:260548/1‑146 (MQ=255)                              cGCCAGGTTGACCGTAGATAGCTCGGCCAGCGGCGTCTGTCTGGGGCACAGGGTAATCAGGTTGGCGCCTCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGccc                                           <  2:51930/148‑1 (MQ=255)                                  aGGTTGACCGTCGATAGCTCGGCCCGCGCCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTCGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCggat                                       >  2:88441/1‑146 (MQ=255)                                    gTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATAAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGttt                                      >  7:36320/1‑147 (MQ=255)                                       gACCGTCGATATCTGGGCCAGCGGCGTCTGGCTGGGGCACATGGTTATCAGGTTTGCTCCGCTATCACGCACCAGGTTGGCTGTTATCAGGAGGTCGTTTGAACGGCACGACTGGGAAATACACAGGGGCTCATCGGGCGGTTTcttg                                  <  8:36320/148‑4 (MQ=255)                                                    tCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTggg                                                                  >  6:315390/1‑103 (MQ=255)                                                    tCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTggg                                                                  <  5:315390/103‑1 (MQ=255)                                                       gCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTAATGGTAACGGCCGCCATCg                  >  8:173659/1‑148 (MQ=255)                                                                gTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCAtgtg        >  2:412311/1‑149 (MQ=255)                                                                 tCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTgg       <  2:331296/149‑1 (MQ=255)                                                                 tCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTgg       <  2:321573/149‑1 (MQ=255)                                                                   tggctggGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTgggg     >  6:224630/1‑149 (MQ=255)                                                                   tggctggGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTgggg     >  8:248305/1‑149 (MQ=255)                                                                      ctggGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTGGGGGTc  <  7:248305/149‑1 (MQ=255)                                                                           gCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTGGGGGt   >  5:65757/1‑143 (MQ=255)                                                                           gCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTGGGGGt   <  6:65757/143‑1 (MQ=255)                                                                           |                                                                                                                                                TAGATCTCGGTGTCTTCATGCACGTCGATCGCCAGGTTGACCGTCGATAGCTCGGCCAGCGGCGTCTGGCTGGGGCACAGGGTAATCAGGTTGGCGCCGCTCTCACGCACCAGGTTGGCAGTGATCAGCAGGTCCTTGGAACGGCCCGACTGGGAAATACACACCGCCACATCGCCCGGTTTCAGGGTAACGGCCGACATCGCTTGCATGTGGGGGTC  >  NC_002947/6098388‑6098605

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑