Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,466,8410TG22.0% 106.6 / 11.3 61intergenic (‑16/+108)PP_3081/PP_5560hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (16/30);  new base G (8/5);  total (26/35)
Fisher's exact test for biased strand distribution p-value = 1.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGC  >  NC_002947/3466694‑3466977
                                                                                                                                                      |                                                                                                                                        
cgTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTg                                                                                                                                         <  3:316919/149‑1 (MQ=255)
       gCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGGCGCCggcggcggc                                                                                                                                  >  3:32633/1‑149 (MQ=255)
        cGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGcc                                                                                                                                 >  6:99324/1‑149 (MQ=255)
        cGGGCAGGTTGTCCCAGCTCAGTTGCGGGGGCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGCCATCGC‑‑‑GCGTTGGCCGCCGCAggcggc                                                                                                                                  <  1:233474/148‑1 (MQ=255)
         gggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACAACGC‑‑‑GCCTTGGCCGCCTCCGGCGGcc                                                                                                                                 >  4:165106/1‑148 (MQ=255)
          ggCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCaa                                                                                                                               <  2:152380/149‑1 (MQ=255)
               gTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGGCGCCGGGGGCGGcccgaaggg                                                                                                                          >  4:403551/1‑142 (MQ=255)
               gTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCggcggc                                                                                                                                  <  3:403551/141‑1 (MQ=255)
               gTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCtg                                                                                                                          >  6:27584/1‑149 (MQ=255)
                ttGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTGGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCtgt                                                                                                                         <  7:365293/149‑1 (MQ=255)
                    cccAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAg                                                                                                                     >  5:260287/1‑149 (MQ=255)
                            aGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaa                                                                                                             <  6:309473/149‑1 (MQ=255)
                             gTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaaa                                                                                                            <  7:9602/149‑1 (MQ=255)
                             gTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCaaa                                                                                                            <  2:15001/149‑1 (MQ=255)
                              ttGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCCCCTGCCGCGGCCAACCCAGTGCAGGGCACCAAag                                                                                                           >  4:181538/1‑149 (MQ=255)
                                  ggggTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagcagc                                                                                                       <  5:99324/149‑1 (MQ=255)
                                      tCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACTAGTAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAAc                                                                                                   <  2:374700/149‑1 (MQ=255)
                                      tCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGaa                                                                                                    >  7:397347/1‑148 (MQ=255)
                                        cGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCAGCCGCGGCCAACACTGTGCAGGGCAACAAAGCAGCGAACac                                                                                                 >  1:85008/1‑148 (MQ=255)
                                          ctctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGCGGGGGAGTGGCCGCCAGCGGCGGGCCACGCGGTGGAGGGGAGCAAATCAGCGAACa                                                                                                  >  1:349053/1‑149 (MQ=255)
                                          ctctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCGGCGGCGGCCCAAGCAGTGCCGGGCAGCCAAGCAGCGAACAAcc                                                                                               >  8:82554/1‑149 (MQ=255)
                                           tctTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTTAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCa                                                                                              <  1:25389/149‑1 (MQ=255)
                                               cACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGGCGCCGGCGGCGGGCCACGCTGTGGAGGGGAGCCAACCAGCGGACAGCCCgtgg                                                                                          >  1:396633/1‑148 (MQ=255)
                                               cACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCGGCGGCGGCCCACCCGGGGCAGGGCCGCAAAGCACCGAACAGCCacggt                                                                                          >  1:392366/1‑145 (MQ=255)
                                                aCCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTc                                                                                         >  4:287498/1‑149 (MQ=255)
                                                   ggCACCGCATGCCGGGTCCTGGCCGACCTGTGGCAGGGAAATGCCGCCGCCATCAGTGAAAGACGAGGAACTGACCGACAGCGC‑‑‑GCCTTGGCCGCCGGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGa                                                                                      <  4:32633/149‑1 (MQ=255)
                                                     cACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCggcggc                                                                                                                                  <  3:371390/103‑1 (MQ=255)
                                                     cACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCggcggc                                                                                                                                  >  4:371390/1‑103 (MQ=255)
                                                        gccttGCGGGGTCCTGGCCCACCGGTTCCCGGGAAATGCCGCCCCAAGAATTCAAACCCGCGCAACTCACCGACTGCCC‑‑‑GCCTTGGCCGCCGGCGGGGCCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGc                                                                                 <  2:352143/145‑1 (MQ=255)
                                                        cGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGGCCCCGGCGGGGGCCCACCCGGTTGAGGGCCCCAAAGCAGCCGACCGCCACTGTCGGAGGTg                                                                                  >  3:11449/1‑148 (MQ=255)
                                                             gCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGt                                                                            >  6:193247/1‑149 (MQ=255)
                                                                gggTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCa                                                                          >  6:136025/1‑148 (MQ=255)
                                                                     cTGGCGGACCTGTTGCAGGTCAATGACGCTGCCATCAGTGAAAGACGAGGAACTGAGCGACATCGC‑‑‑GCCTTGGCCGCCTGGGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAgg                                                                                    <  3:17964/133‑1 (MQ=255)
                                                                     cTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGGAGGgcag                                                                                                                >  4:41241/1‑105 (MQ=255)
                                                                     cTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGgcag                                                                                                                <  3:41241/105‑1 (MQ=255)
                                                                      tGGCCGACCTGTTGCAGGGCAATGACACCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCCACCCAGTGCAGGGCAGCAAACCACCGAAAAGCCATGGTCTGCGGGGCATGGTCAATCATTg                                                                   >  8:35988/1‑149 (MQ=255)
                                                                       ggCCGACCTGTTGCAGGGCAAGGACGCCGCCATCAGTCAACGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTgg                                                                  <  6:260287/149‑1 (MQ=255)
                                                                        gCCGACCTGTTGCAGGGCAATGACGCCGCCTTCAGTTAAAGACTTGTAACTGACCGACAACGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGc                                                                 <  3:165106/149‑1 (MQ=255)
                                                                        gCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCGGCGGCGGCCCACCCGGTGCCGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGc                                                                 >  3:205151/1‑149 (MQ=255)
                                                                           gACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagc                                                                                                          <  7:386514/105‑1 (MQ=255)
                                                                           gACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAagc                                                                                                          >  8:386514/1‑105 (MQ=255)
                                                                             ccTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGc                                                            <  5:193247/149‑1 (MQ=255)
                                                                             ccTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCGGCGGCGGCCAACCCAGTGCAGCGCACCAAAGCAGCCAACAGCCACTGTCTGAGGTGCATGGTCAAAACATGGCAGGGc                                                            >  3:71489/1‑149 (MQ=255)
                                                                                gTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCCC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCtgt                                                                                                                         <  3:87876/85‑1 (MQ=255)
                                                                                     aGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCCACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGGGAATCCTTGGCAGGGCGTCACGGc                                                    >  2:132274/1‑149 (MQ=255)
                                                                                      gggCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCt                                                   <  3:287498/149‑1 (MQ=255)
                                                                                               cgccgcCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGc                                          <  5:136025/149‑1 (MQ=255)
                                                                                               cgccgcCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGc                                          <  7:82554/149‑1 (MQ=255)
                                                                                                  cgccATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCa                                       <  5:27584/149‑1 (MQ=255)
                                                                                                   gccATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGTCCGCGTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGTTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAg                                      <  2:85008/149‑1 (MQ=255)
                                                                                                         aGTGAAAGACGTGTACCTGTCCCATATCGC‑‑‑GCCTTGGCGGCTGGGGGGGGCCAACGCTGTGCAGGTCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTg                                 <  4:11449/148‑1 (MQ=255)
                                                                                                                 aCGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCTGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCgg                        <  1:132274/149‑1 (MQ=255)
                                                                                                                 aCGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCgg                        >  6:325709/1‑149 (MQ=255)
                                                                                                                 aCGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCgg                        <  6:205737/149‑1 (MQ=255)
                                                                                                                   gAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCt                      <  3:181538/149‑1 (MQ=255)
                                                                                                                         cTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTg                <  8:397347/149‑1 (MQ=255)
                                                                                                                         cTGACCGAAATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTg                <  4:71489/149‑1 (MQ=255)
                                                                                                                             ccGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTcc            <  2:349053/149‑1 (MQ=255)
                                                                                                                             ccGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTc             <  5:325709/148‑1 (MQ=255)
                                                                                                                                   tCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCa      <  1:387322/149‑1 (MQ=255)
                                                                                                                                          gcCTTGGCCGCCTGCGGCGGCCAACCCTGTGCAGGGCCGCAAAGCAGCGCACAGCCAGTGTCTGAGGTGCATGGtg                                                                           >  7:151028/1‑75 (MQ=255)
                                                                                                                                           cgttGGCCGCCGCAGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGc  >  1:313410/3‑148 (MQ=255)
                                                                                                                                                      |                                                                                                                                        
CGTACCTGCGGGCAGGTTGTCCCAGCTCAGTTGCGGGGTCCGCTCTTCACCGGCACCGCATGCCGGGTCCTGGCCGACCTGTTGCAGGGCAATGACGCCGCCATCAGTGAAAGACGAGGAACTGACCGACATCGC‑‑‑GCCTTGGCCGCCTGCGGCGGCCAACGCTGTGCAGGGCAGCAAAGCAGCGAACAGCCAGTGTCTGAGGTGCATGGTCAATCCTTGGCAGGGCGTCACGGCTCAGTCTAGCCCAGGTCTGCTTCAGCGGCTGTCCTGGTCCTCGGCAGTGC  >  NC_002947/3466694‑3466977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑