| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,360,293:1 | +G | 10.1% | coding (829/1161 nt) | PP_3835 ← | two‑component system sensor histidine kinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,360,293 | 1 | . | G | 10.1% | 249.6 / 20.8 | 69 | coding (829/1161 nt) | PP_3835 | two‑component system sensor histidine kinase |
| Reads supporting (aligned to +/- strand): ref base . (29/33); new base G (4/3); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
AAGATGCGCGGCAGTATCTCTGTGGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTGGCAATGCATGTTCAAGCAGGCCACGCGTAGCGTTAAC > NC_002947/4360145‑4360437 | aaGATGCGCGGCAGTATCTCTGTGGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATc < 5:84014/149‑1 (MQ=255) gcgGCAGTATCTCTGTGGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCa > 8:314986/1‑149 (MQ=255) gcgGCAGTATCTCTGTGGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCa > 2:52263/1‑149 (MQ=255) gCAGTATCTCTGTGGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGT‑GATGCCATCGACGGGCAtgg < 3:194719/149‑3 (MQ=255) aGTATCTCTGTGGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGaa < 1:52263/149‑1 (MQ=255) aGTATCTCTGTGGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGT‑GATGCCATCGACGGGCAtggcc < 3:301824/149‑5 (MQ=255) tgtgGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAacaaca < 7:186544/146‑1 (MQ=255) tgtgGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGt > 3:352325/1‑149 (MQ=255) ggTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCTCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGa < 5:155516/148‑1 (MQ=255) gTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGc < 4:46150/149‑1 (MQ=255) aTGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCaa > 3:145817/1‑149 (MQ=255) tGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCaa < 5:162326/148‑1 (MQ=255) tGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAac < 4:352325/149‑1 (MQ=255) cTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGa > 8:288927/1‑141 (MQ=255) cTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGa < 7:288927/141‑1 (MQ=255) cTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAacac < 3:171504/148‑1 (MQ=255) cTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAacac > 4:171504/1‑148 (MQ=255) ttCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCa > 7:98642/1‑149 (MQ=255) tGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGt > 4:61080/1‑149 (MQ=255) cACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCg < 7:314986/148‑1 (MQ=255) cACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCg < 4:289874/148‑1 (MQ=255) cACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCg < 4:123277/148‑1 (MQ=255) aCCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCATCACCATCTGCAGTTGCCCgg > 5:285630/1‑148 (MQ=255) aCCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCgg > 2:330808/1‑148 (MQ=255) aCCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCgg > 5:290618/1‑148 (MQ=255) ccTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCt > 7:96140/1‑135 (MQ=255) ccTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCt < 8:96140/135‑1 (MQ=255) ccTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCa < 1:330808/149‑1 (MQ=255) cGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATc > 1:354727/1‑148 (MQ=255) gAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATcc < 1:295034/148‑1 (MQ=255) gcgcACGAAGCTGCCCTTCAGCCCTTCATCTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCt < 8:134229/149‑1 (MQ=255) cACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGa > 6:360337/1‑149 (MQ=255) aCGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGAt < 8:98642/149‑1 (MQ=255) aCGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGAt < 4:138957/149‑1 (MQ=255) tGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGACTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGccc < 4:234413/127‑1 (MQ=255) tGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGACTGATGCGGCCATGCCCGACGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGccc > 3:234413/1‑127 (MQ=255) cccttcagcccttcaACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAg > 4:122813/1‑149 (MQ=255) cccttcagcccttcaACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAg > 7:43/1‑149 (MQ=255) ccttcagcccttcaACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAgg < 5:360337/149‑1 (MQ=255) cccttcaACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAg > 4:242359/1‑96 (MQ=255) cccttcaACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAg < 3:242359/96‑1 (MQ=255) caACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTgcag > 6:49604/1‑148 (MQ=255) ttCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTc < 6:95668/120‑1 (MQ=255) ttCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTc > 5:95668/1‑120 (MQ=255) ttCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAaca > 1:65570/1‑149 (MQ=255) ccGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCtt < 4:145817/149‑1 (MQ=255) cGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAATAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCa < 2:350796/107‑1 (MQ=255) cGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAATAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCa > 1:350796/1‑107 (MQ=255) gAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTc > 2:192896/1‑148 (MQ=255) acaacTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAg < 2:354727/149‑1 (MQ=255) caacTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGt < 3:61080/149‑1 (MQ=255) cTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTgca > 8:282413/1‑131 (MQ=255) cTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTgca < 7:282413/131‑1 (MQ=255) gACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAAt < 3:122813/147‑1 (MQ=255) gACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCg < 5:49604/149‑1 (MQ=255) caTCGACAGTCAGGCTGATGCTGCCTTGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCGACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCtt < 5:325757/149‑1 (MQ=255) aTCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAg < 2:300702/66‑1 (MQ=255) aTCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAg > 1:300702/1‑66 (MQ=255) aGTCAGGCTGATGCGCCCATGCCCGTCGATGGCATC‑ACGGGCAATGAACCACAGCTTGAGCAACCCCATCTGCAGTTGACCGGCAACAACGGCGATCAACGGCAGGGCCGGTTGCAGCAACACCTACAAGACAATCGAGCTTGGCAAtc > 6:267378/1‑148 (MQ=255) tCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTGGCAATCCa > 2:303462/1‑149 (MQ=255) gttcaaTGCCCGT‑GATGCCATCGACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTGGCAATGCATGTTCAAGCAg > 2:269554/6‑149 (MQ=255) caaTGCCCGT‑GATGCCATCGACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTgg < 2:164503/126‑1 (MQ=255) caaTGCCCGT‑GATGCCATCGACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTgg > 1:164503/3‑128 (MQ=255) caaTGCCCGT‑GATGACATCGACGGGCATTGAACAAAAGGTTGAGCAACACCATCTTCAGTTGCCAGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTgg > 1:169883/3‑128 (MQ=255) aaTGCCCGT‑GATGCCATCGACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTGGCAATGCATGTTCAAGCAGGCCa > 3:6794/2‑149 (MQ=255) ccGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTGGCAATGCATGTTCAAGCAGGCCAcgcg > 5:135104/1‑148 (MQ=255) gATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTGGCAATGCATGTTCAAGCAGGCCACGCGTAGCg < 7:111100/148‑1 (MQ=255) gCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTGGCAATGCATGTTCAAGCAGGCCACGCGTAGCGTTAAc < 1:192896/149‑1 (MQ=255) cATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAAc < 1:71460/68‑1 (MQ=255) cATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAAc > 2:71460/1‑68 (MQ=255) | AAGATGCGCGGCAGTATCTCTGTGGGTATGCCTTCGCCGCTGTCTTCCACCTCGAAGCGCACGAAGCTGCCCTTCAGCCCTTCAACTTCGCCGAACAACTCGACCACATCGACAGTCAGGCTGATGCGGCCATGCCCGTCGATGGCATC‑ACGGGCATTGAACAACAGGTTGAGCAACACCATCTGCAGTTGCCCGGCATCCACCTCGATCAACGGCAGGTCCGGTTGCAGCAACACCTTCAAGTCAATCGAGCTTGGCAATGCATGTTCAAGCAGGCCACGCGTAGCGTTAAC > NC_002947/4360145‑4360437 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |