New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 36650 | 61 (1.080) | 4 (0.070) | 4/248 | NT | 6.6% | coding (1003/1455 nt) | PP_0033 | undecaprenyl‑glycosyl transferase |
? | NC_002947 | = 36682 | 55 (1.010) | coding (971/1455 nt) | PP_0033 | undecaprenyl‑glycosyl transferase |
GGGCGCTCCTCTAGTACCCCGGCGTAGATGATGCCCGCACCGATGATTGGCAACACCAATGCGCTCGCAGCGGCAGCCCAGGTGGTCTTCGGGCCAACTTCGCTGACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/36541‑36650 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgCGCTGCCAGCGTGGGCATTGCTGCTGTCTGCACGGGTCAG < NC_002947/36682‑36643 GGGCGCTCCTCTAGTACCCCGGCGTAGATGATGCCCGCACCGATGATTGGCAACACCAATGCGCTCGCAGCGGCAGCCCAGGTGGTCTTCGGGCCAACTTCGCTGACCCGCGCTGCCAGCGTGGGCATTGCTGCTGTCTGCACGGGTCA < 7:239528/149‑1 GGCGCTCCTCTAGTACCCCGGCGTAGATGATGCCCGCACCGATGATTGGCAACACCAATGCGCTCGCAGCGGCAGCCCAGGTGGTCTTCGGGCCAACTTCGCTGACCCGCGCTGCCAGCGTGGGCATTGCTGCTGTCTGCACGGGTCAG < 1:244063/149‑1 CCCGGCGTAGATGATGCCCGCACCGATGATTGGCAACACCAATGCGCTCGCAGCGGCAGCCCAGGTGGTCTTCGGGCCAACTTCGCTGACCCGCGCTGCCAGCGTGGGCATTGCTGCTGTCTGCACGGGTC > 5:200884/1‑131 CCCGGCGTAGATGATGCCCGCACCGATGATTGGCAACACCAATGCGCTCGCAGCGGCAGCCCAGGTGGTCTTCGGGCCAACTTCGCTGACCCGCGCTGCCAGCGTGGGCATTGCTGCTGTCTGCACGGGTC < 6:200884/131‑1 GGGCGCTCCTCTAGTACCCCGGCGTAGATGATGCCCGCACCGATGATTGGCAACACCAATGCGCTCGCAGCGGCAGCCCAGGTGGTCTTCGGGCCAACTTCGCTGACCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/36541‑36650 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acccgCGCTGCCAGCGTGGGCATTGCTGCTGTCTGCACGGGTCAG < NC_002947/36682‑36643 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |