New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 77147	60 (1.060)	5 (0.090)	5/250	NT	7.4%	coding (397/1311 nt)	rsmB	ribosomal RNA small subunit methyltransferase B
	?	NC_002947	= 77201	67 (1.220)					coding (343/1311 nt)	rsmB	ribosomal RNA small subunit methyltransferase B

CGCGGCTATGGTGACGGCGGTTGACCCGCAGAATCATCGGAGGGTGGGCATTGTTGGCGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/76997‑77147 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcAATGCCGTGCTGCGCCGTGCCCAGCGCGAAGGCGAGGAGCTGCTCGCCGGCATGGAGCGCGACCCGGTGGTGCGTACCGCGCACCCGCGCTGGCTGCAGAAGGCGCTGAAAGCCTTCTGGCCAGAGCAGTGGGAGGCCATCTGCGCCG  <  NC_002947/77201‑77054                                                                                                                                                                                                                                                                                                             CGCGGCTATGGTGACGGCGGTTGACCCGCAGAATCATCGGAGGGTGGGCATTGTTGGCGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCG                                                                                                                                                         >  2:111943/1‑148  GCGGCTATGGTGACGGCGGTTGACCCGCAGAATCATCGGAGGGTGGGCATTGTTGGCGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGC                                                                                                                                                        <  3:71687/148‑1                GGCGGTTGACCCGCAGAATCATCGGAGGGTGGGCATTGTTGGCGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCAATGCCGTGCTGC                                                                                                                                         >  6:213397/1‑149                          CCGCAGAATCATCGGAGGGTGGGCATTGTTGGTGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGC                                                                                                                                                        <  7:304130/124‑1                          CCGCAGAATCATCGGAGGGTGGGCATTGTTGGTGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGC                                                                                                                                                        >  8:304130/1‑124                                            GTGGGCATTGTTGGCGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCG                                                                                                                                                         >  1:272324/1‑105                                            GTGGGCATTGTTGGCGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCG                                                                                                                                                         <  2:272324/105‑1                                                          CGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCCATGCCGTGCTGCGCCGTGCCCAGCGCGAAGGCGAGGAGCTGCTCGCCGGCATGG                                                                                               <  5:191682/149‑1                                                            GCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCT                                                                                                                                                       <  3:310342/91‑1                                                            GCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCT                                                                                                                                                       >  4:310342/1‑91                                                               CAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCAATGCCGTGCTGCGCCGTGCCCAGCGCGAAGGCGAGGAGCTGCTCGCCGGCATGGAGCGC                                                                                          <  5:213397/149‑1                                                                                       CAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCAATGCCGTGCTGCGCCGTGCCCAGCGCGAAGGCGAGGAGCTGCTCGCCGGCAT                                                                                                 <  5:185214/118‑1                                                                                       CAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTCAATGCCGTGCTGCGCCGTGCCCAGCGCGAAGGCGAGGAGCTGCTCGCCGGCAT                                                                                                 >  6:185214/1‑118                                                                                                                                                       CAATGCCGTGCTGCACCGTGCCCAGCGCGAAGGCGAGGAGCTGCTCGCCGGCATGGAGCGCGACCCGGTGGTGCGTACCGCGCACCCGCGCTGGCTGCAGAAGGCGCTGAAAGCCTTCTGGCCAGAGCAGTGGGAGGCCATCTGCGCCG  >  4:141470/1‑149                                                                                                                                                                                                                                                                                                             CGCGGCTATGGTGACGGCGGTTGACCCGCAGAATCATCGGAGGGTGGGCATTGTTGGCGGCGCAGATGGCCTCCCACTGCTCTGGCCAGAAGGCTTTCAGCGCCTTCTGCAGCCAGCGCGGGTGCGCGGTACGCACCACCGGGTCGCGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/76997‑77147 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcAATGCCGTGCTGCGCCGTGCCCAGCGCGAAGGCGAGGAGCTGCTCGCCGGCATGGAGCGCGACCCGGTGGTGCGTACCGCGCACCCGCGCTGGCTGCAGAAGGCGCTGAAAGCCTTCTGGCCAGAGCAGTGGGAGGCCATCTGCGCCG  <  NC_002947/77201‑77054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.