New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	214397 =	NA (NA)	4 (0.070)	4/258	NT	6.8%	coding (19903/26049 nt)	PP_0168	putative surface adhesion protein
	?	NC_002947	217012 =	55 (0.970)					coding (22518/26049 nt)	PP_0168	putative surface adhesion protein

GACATCACGACAGGGTCGTTGGTGCCGAC‑GTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/214461‑214397 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGTGCCGGCCAACGGCACCGTGG  >  NC_002947/217012‑217037                                                                                              GACATCACGACAGGGTCGTTGCTGCCGAC‑GTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACCGTGCCGGCCAACGGCACCGTGG  >  1:326590/1‑91 GACATCACGACAGGGTCGTTGCTGCCGAC‑GTAGACGTTGTCCGGGGCAGTCACGGTTGCAGTGCCCACCGTGCCGGCCAACGGCACCGTGG  <  2:326590/91‑1  ACATCACGACAGGGTCGTTGGTGCCGACAGTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACCGTGCCGGCCAACGGCACCGTG   >  1:204656/1‑90  ACATCACGACAGGGTCGTTGGTGCCGAC‑GTAGACGTTGTCCGGGGCAGTGACGGTAGCAGTGCCCACCGTGCCGGCCAACGGCACCGTG   <  2:204656/89‑1                                                                                              GACATCACGACAGGGTCGTTGGTGCCGAC‑GTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/214461‑214397 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACCGTGCCGGCCAACGGCACCGTGG  >  NC_002947/217012‑217037

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.