New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 276776 = | 49 (0.870) | 3 (0.060) | 3/244 | NT | 5.6% | coding (392/1221 nt) | PP_0223 | DszC family monooxygenase |
? | NC_002947 | 276836 = | 55 (1.030) | coding (332/1221 nt) | PP_0223 | DszC family monooxygenase |
ACCCTGGCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/276930‑276776 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtttACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGACCTTG > NC_002947/276836‑276922 ACCCTGGCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCG > 5:111694/1‑149 TGGCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGT > 4:149796/1‑149 GCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTT < 5:309131/149‑1 GTAAACGGCAGCCCCGAACAGTAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTTACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGACCTTG > 6:68688/1‑149 TAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTTACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGAC < 7:110017/144‑1 TAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTTACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGAC > 8:110017/1‑144 CCGTTTACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGA < 3:350593/88‑1 CCGTTTACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGA > 4:350593/1‑88 ACCCTGGCCAAGGTCATCGCCCGTATCGCGCAGGCCGACGGTTCGCTCGGGCAGATTCCGCAGAATCATTTCTACGGTCTGGAAGTGCTGCGGGTAAACGGCAGCCCCGAACAGCAACAGCGCCTGTACGCCGAGGTGCTGGCCGGCCGCCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/276930‑276776 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtttACCCGCAGCACTTCCAGACCGTAGAAATGATTCTGCGGAATCTGCCCGAGCGAACCGTCGGCCTGCGCGATACGGGCGATGACCTTG > NC_002947/276836‑276922 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |