New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	324733 =	63 (1.110)	6 (0.110)	6/244	NT	9.6%	coding (19/1320 nt)	oprQ	outer‑membrane porin D
	?	NC_002947	324772 =	54 (1.010)					coding (58/1320 nt)	oprQ	outer‑membrane porin D

GATCTGGTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/324885‑324733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggctCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACTTC  >  NC_002947/324772‑324915                                                                                                                                                                                                                                                                                                            GATCTGGTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCA                                                                                                                                                      >  6:74415/1‑149                            GTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGC                                                                                                                                                   <  3:35241/125‑1                            GTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGC                                                                                                                                                   >  4:35241/1‑125                            GTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGG                                                                                                                                                    >  1:275812/1‑124                            GTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGG                                                                                                                                                    <  2:275812/124‑1                                                                                                                CTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATG                                                 >  6:193321/1‑139                                                                                                                CTGAGCCTGGGGCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATG                                                 <  5:193321/139‑1                                                                                                                   AGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGAC                                      >  4:93510/1‑147                                                                                                                    GCCTGGGTCGCGGCGATCATCGCCAGGGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGAC                                      >  3:328645/1‑147                                                                                                                      CTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGAC                                      >  1:162107/1‑144                                                                                                                             GCGGCGATCATCGCCAGGGCGACCCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATG                           <  4:328645/149‑1                                                                                                                                                    CCAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACT    >  8:324579/1‑149                                                                                                                                                     CAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACTT   >  2:292603/1‑149                                                                                                                                                     CAGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACT    >  7:326428/1‑148                                                                                                                                                      AGGCTCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACTTC  <  7:185169/149‑1                                                                                                                                                                                                                                                                                                            GATCTGGTCGTCGGTGCCATGCTTCTTGTCACGGTTGATGTAGGCGTTGCGCAGAAGGACGTTGGCGTGACTGTCCTCGATGAAGCCCTTGCTGTCAGCCTGGTCATTGGCCTGAGCCTGGGTCGCGGCGATCATCGCCAGGGCGA‑CCAGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/324885‑324733 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccaggctCAGGCCAATGACCAGGCTGACAGCAAGGGCTTCATCGAGGACAGTCACGCCAACGTCCTTCTGCGCAACGCCTACATCAACCGTGACAAGAAGCATGGCACCGACGACCAGATCGAATGGGGCCAGGCGTTCATCGCCAACTTC  >  NC_002947/324772‑324915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.