New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	341556 =	55 (0.970)	4 (0.070)	4/250	NT	6.9%	coding (73/1386 nt)	gabP‑I	gamma‑aminobutyrate permease
	?	NC_002947	341643 =	54 (0.990)					coding (160/1386 nt)	gabP‑I	gamma‑aminobutyrate permease

CCGGCGGCAGCGTAAGCCAGCAGCACGGCAGGGCCGGCCGCTGCGATGGCGTGGCCGGAGCCTACGAACAGGCCGGCACCGATGACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/341644‑341556 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccGGTACGCTGGTCGTGCTGGTGATGCGTATGTTGGGTGAAATGGCAGTCGCCTCGCCTGACACCGGTTCG  >  NC_002947/341643‑341711                                                                                                                                                                CCGGCGGCAGCGTAAGCCAGCAGCACGGCAGGGCCGGCCGCTGCGATGGCGTGGCCGGAGCCTACGAACAGGCCGGCACCGATGACGCCGGTACGCTGGTCGTGCCGGTGATGCGTATGTTGGGTGAAATGGCAGTCGCCTCGCCTGA            >  5:84992/1‑148    GCGGCAGCGTAAGCCAGCAGCACGGCAGGGCCGGCCGCTGCGATGGCGTGGCCGGAGCCTACGAACAGGCCGGCACCGATGACGCCGGTACGCTGGTCGTGCTGGTGATGCGTATGTTGGGTGAAATGGCAGTCGCCTCGCCTGAC           <  4:8996/146‑1    GCGGCAGCGTAAGCCAGCAGCACGGCAGGGCCGGCCGCTGCGATGGCGTGGCCGGAGCCTACGAACAGGCCGGCACCGATGACGCCGGTACGCGGGTCGTGCTGGTGATGCGTATGTTGGGTGAAATGGCAGTCGCCTCGCCTGAC           >  3:8996/1‑146          GCGTAAGCCAGCAGCACGGCAGGGCCGGCCGCTGCGATGGCGTGGCCGGAGCCTACGAACAGGCCGGCACCGATGACGCCGGTACGCTGGTCGTGCCGGTGATGCGTATGTTGGGTGAAATGGCAGTCGCCTCGCCTGACACCGGTTCG  <  6:84992/149‑1                                                                                                                                                                CCGGCGGCAGCGTAAGCCAGCAGCACGGCAGGGCCGGCCGCTGCGATGGCGTGGCCGGAGCCTACGAACAGGCCGGCACCGATGACGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/341644‑341556 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccGGTACGCTGGTCGTGCTGGTGATGCGTATGTTGGGTGAAATGGCAGTCGCCTCGCCTGACACCGGTTCG  >  NC_002947/341643‑341711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.