New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	445618 =	68 (1.200)	7 (0.130)	5/248	NT	10.0%	coding (304/1806 nt)	PP_0368	acyl‑CoA dehydrogenase
	?	NC_002947	445651 =	60 (1.100)					coding (337/1806 nt)	PP_0368	acyl‑CoA dehydrogenase

GTCAGGTAGGTGTGCTGCTGCTCGGCAGTGCCATGCGCAGAAATAGTGTTCATCGCGCCATGCGACAGGCCTGGGTACATACCCCACGACCAGTTCGAGCCACCGACCATTTCGCTCAGGGCCAGGCCCAGCGACTCTGGCAGGCCTTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/445769‑445618 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGTACCCAGGCCTGTCGCATGGCGCGATGAACACTATTTCTGCGCATGGCACTGCCGAGCAGCAGCACACCTACCTGACCAAGCTGGT  >  NC_002947/445651‑445778                                                                                                                                                                                                                                                                                          GTCAGGTAGGTGTGCTGCTGCTCGGCAGTGCCATGCGCAGAAATAGTGTTCATCGCGCCATGCGACAGGCCTGGGTACATACCCCACGACCAGTTCGAGCCACTGACCATTTCGCTCAGGGCCAGGCCCAGCGACTCTGGCAGGCCTTG                                                                                                                                     <  1:20445/149‑1    AGGTAGGTGTGCTGCTGCTCGGCAGTGCCATGCGCAGAAATAGTGTTCATCGCGCCATGCGACAGGCCTGGGTACATACCCCACGACCAGTTCGAGCCACCGACCATTTCGCTCAGGGCCAGGCCCAGCGACTCTGGCAGGCCTTGGC                                                                                                                                   <  7:56208/148‑1                                                                                                                  GCTCAGGGCCAGGCCCAGCGACTCTGGCAGGCCTTGGCCCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGT                                                                                       <  5:220795/82‑1                                                                                                                  GCTCAGGGCCAGGCCCAGCGACTCTGGCAGGCCTTGGCCCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGT                                                                                       >  6:220795/1‑82                                                                                                                    TCAGGGCCAGGCCCAGCGACTCTGGCAGGCCTTGGCCCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGTACCCAGGCCTGTCGCATGGCGCGATGAACACTATTTCTGCGCATGGCACTGCCGAGCAGCAGCACACC                   >  1:196697/1‑148                                                                                                                    TCAGGGCCAGGCCCAGCGACTCTGGCAGCCCTTGGCCCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGTACCCAGGCCTGTCGCATGGCGCGATGAACACTATTTCTGCGCATGGCACTGCCGAGCAGCAGCACACC                   >  1:202220/1‑148                                                                                                                          CCAGGCCCATCGACTCTGGCAGGCCTTGGCCCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGTACACAGGCCTGTCGCATGGCGCGAGGAACACTATTTCTGCGCATGGAACTGCCGAGCAGCAGCACACCTACCTGA            >  1:200150/1‑149                                                                                                                                    CGACTCTGGCAGGCCTTGGCCCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGTACCCAGGCCTGTCGCATGGCGCGATGAACACTATTTCTGCGCATGGCACTGCCGAGCAGCAGCACACCTACCTGACCAAGCTGGT  <  2:196697/149‑1                                                                                                                                    CGACTCTGGCAGGCCTTGGCCCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGTACCCAGGCCTGTCGCATGGCGCGATGAACACTATTTCTGCGCATGGCACTGCCGAGCAGCAGCACACCTACCTGACCAAGCTGGT  <  2:202220/149‑1                                                                                                                                                                                                                                                                                          GTCAGGTAGGTGTGCTGCTGCTCGGCAGTGCCATGCGCAGAAATAGTGTTCATCGCGCCATGCGACAGGCCTGGGTACATACCCCACGACCAGTTCGAGCCACCGACCATTTCGCTCAGGGCCAGGCCCAGCGACTCTGGCAGGCCTTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/445769‑445618 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccCTGAGCGAAATGGTCGGTGGCTCGAACTGGTCGTGGGGTATGTACCCAGGCCTGTCGCATGGCGCGATGAACACTATTTCTGCGCATGGCACTGCCGAGCAGCAGCACACCTACCTGACCAAGCTGGT  >  NC_002947/445651‑445778

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.