| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 646796 = | 69 (1.220) | 5 (0.090) | 4/248 | NT | 6.9% | coding (419/1854 nt) | acoR | acetoin catabolism regulatory protein |
| ? | NC_002947 | 646817 = | 69 (1.270) | coding (440/1854 nt) | acoR | acetoin catabolism regulatory protein | |||||
GCCGATCGTCCGGCGACTGCAAGGCCGACACATCTACCACGCCCAACAACTCACCCAACGGGTCGAACACCGGCGCCGCTGTGCAGGTCAGGCCGATGAAGGCGGCGCGAAAGTGA‑TCGCGCTTGTGCACCGTGACCGGAGCCTTGCTGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/646948‑646796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaCGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGCCTGACCTGCACAGCGGCGCCGGTGTTCGACCCGTTGGGTGAGTTGTTGGGCGTGGTAGATGTGTCGGCCTTGCAGTCGCCGGACGATCGGCGCAGCCAGCACCTGA > NC_002947/646817‑646963 GCCGATCGTCCGGCGACTGCAAGGCCGACACATCTACCACGCCCAACAACTCACCCAACGGGTCGAACACCGGCGCCGCTGTGCAGGTCAGGCCGATGAAGGCGGCGCGAAAGTGA‑TCGCGCTTGTGCACCGTGACCGGAGCCTTGCTG < 1:312440/149‑1 CGATCGTCCGGCGACTGCAAGGCCGACACATCTACCACGCCCAACAACTCACCCAACGGGTCGAACACCGGCGCCGCTGTGCAGGTCAGGCCGATGAAGGCGGCGCGAAAGTGA‑TCGCGCTTGTGCACCGTGACCGGAGCCTTGCTGGT < 2:147147/149‑1 CCAACAACTCACCCAACGGGTCGAACACCGGCGCCGCTGTGCAGGTCAGGCCGATGAAGGCGGCGCGAAAGTGATTCGCGCTTGTGCACCGTGACCGGAGCCTTGCTG < 1:49065/108‑1 CCAACAACTCACCCAACGGGTCGAACACCGGCGCCGCTGTGCAGGTCAGGCCGATGAAGGCGGCGCGAAAGTGA‑TCGCGCTTGTGCACCGTGACCGGAGCCTTGCTG > 2:49065/1‑107 CACCGTGACCGGAGCCTTGCTGGTCACGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGCCTGACCTGCACAGCGGCGCCGGTGTTCGACCCGTTGG > 1:80845/1‑104 CACCGTGACCGGAGCCTTGCTGGTCACGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGCCTGACCTGCACAGCGGCGCCGGTGTTCGACCCGTTGG < 2:80845/104‑1 CCGTGACCGGAGCCTTGCTGGTCACGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGC > 5:362082/1‑65 CCGTGACCGGAGCCTTGCTGGTCACGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGC < 6:362082/65‑1 CCGTGACCGGAGCCTTACTGGTCACGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGCCTGACCTGCACAGCGGCGCCGGTGTTCGACCCGTTGGGTGAGTTGTTGGGCGTGGTAGATGTGTCGGCCTTGCAGTCGCCGGAC > 3:107927/1‑149 GTCACGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGCCTGACCTGCACAGCGGCGCCGGTGTTCGACCCGTTGGGTGAGTTGTTGGGCGTGGTAGATGTGTCGGCCTTGCAGTCGCCGGACGATCGGCGCAGCCAGCACCT > 3:348713/1‑149 GTCACGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGCCTGACCTGCACAGCGGCGCCGGTGTTCGACCCGTTGGGTGAGTTGTTGGGCGTGGTAGATGTGTCGGCCTTGCAGTCGCCGGACGATCGGCGCAGCCAGCACCT > 4:188669/1‑149 ACGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGCCTGACCTGCACAGCGGCGCCGGTGTTCGACCCGTTGGGTGAGTTGTTGGGCGTGGTAGATGTGTCGGCCTTGCAGTCGCCGGACGATCGGCGCAGCCAGCACCTGA < 1:147147/148‑1 GCCGATCGTCCGGCGACTGCAAGGCCGACACATCTACCACGCCCAACAACTCACCCAACGGGTCGAACACCGGCGCCGCTGTGCAGGTCAGGCCGATGAAGGCGGCGCGAAAGTGA‑TCGCGCTTGTGCACCGTGACCGGAGCCTTGCTGGTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/646948‑646796‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggtcaCGGTGCACAAGCGCGATCACTTTCGCGCCGCCTTCATCGGCCTGACCTGCACAGCGGCGCCGGTGTTCGACCCGTTGGGTGAGTTGTTGGGCGTGGTAGATGTGTCGGCCTTGCAGTCGCCGGACGATCGGCGCAGCCAGCACCTGA > NC_002947/646817‑646963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |