New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	785539 =	56 (0.990)	3 (0.050)	3/250	NT	5.5%	coding (387/3831 nt)	PP_0672	sensory box protein
	?	NC_002947	785585 =	49 (0.890)					coding (341/3831 nt)	PP_0672	sensory box protein

GGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/785584‑785539 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACGCTCTGCAGGGCGGGAAGGCGTTCGCGCAGGGTACCGAGCAGGCTGGGCAGGGCGGCAGGTGTCGGTGCATCAGGGTAGGGTTGCACCACGTTCACGGCCTGTTGCGCCTTGAGCGCCATGTTCAGGCTCAGGTGGTCGGCCAG  >  NC_002947/785585‑785730                                                                                                                                                                                                  GGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCACGCTCTGCAGGGCGGGAAGGCGTTCGCGCAGGGTACCGAGCAGGCTGGGCAGGGCGGCAGGTGTCGGTGCATCAGGGTAGGGTTGCACCACGTTCACGGCCT                                             >  8:311811/1‑149  GCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCACGCTCTGCAGGGCGGGAAGGCGTTCGCGCAGGGTACCGAGCAGGCTGGGCAGGGCGGCAGGTGTCGGTGCATCAGGGTAGGGTTGCACCACGTTCACGGCCTG                                            >  3:254559/1‑149   CCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCCACGCTCTGCAGGGCGGGAAGGCGTTCGCGCAGGGTACCGAGCAGGCTGGGCAGGGCGGCAGGTGTCGGTGCATCAGGGTAGGGTTGCACCACGTTCACGGCCTGT                                           <  7:311811/149‑1                                            GCCACGCTCTGCAGGGCGGGAAGGCGTTCGCGCAGGGTACCGAGCAGGCTGGGCAGGGCGGCAGGTGTCGGTGCATCAGGGTAGGGTTGCACCACGTTCACGGCCTGTTGCGCCTTGAGCGCCATGTTCAGGCTCAGGTGGTCGGCCAG  >  7:305935/1‑149                                                                                                                                                                                                  GGCCTGGCTGGACAACGTCGGGCAGCTACGCGCCGACAGCCTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/785584‑785539 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccACGCTCTGCAGGGCGGGAAGGCGTTCGCGCAGGGTACCGAGCAGGCTGGGCAGGGCGGCAGGTGTCGGTGCATCAGGGTAGGGTTGCACCACGTTCACGGCCTGTTGCGCCTTGAGCGCCATGTTCAGGCTCAGGTGGTCGGCCAG  >  NC_002947/785585‑785730

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.