| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 793981 = | 51 (0.900) | 4 (0.070) | 4/246 | NT | 7.4% | coding (123/2439 nt) | PP_0680 | ATP‑dependent protease‑like protein |
| ? | NC_002947 | 794035 = | 52 (0.960) | coding (177/2439 nt) | PP_0680 | ATP‑dependent protease‑like protein | |||||
GTCGGCCGGGGTCTGCTGGCGCTTGCCCTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/794134‑793981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctggTTACAATGTGTATGTGATGGGCGAGCCCGGCACCGGGCGCTTCTCGTTCGTCAAGCGCTACCTCAAGGCCGAGGGCAAGCGCCAGCAGACCCCGGCCGACTGGGTCTACGTCAACCACTTCGACGACACCCGTGAACCACGTGCACTG > NC_002947/794035‑794182 GTCGGCCGGGGTCTGCTGGCGCTTGCCCTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTT > 5:196508/1‑149 GGCCGGGGTCTGCTGGCGCTTGCCCTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCC < 5:288001/148‑1 GCCGGGGTCTGCTGGCGCTTGCCCTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCCTG < 3:166990/149‑1 CTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCCTGG > 5:149590/1‑127 CTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCCTGG < 6:149590/127‑1 CTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTC > 1:61247/1‑123 CTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTC < 2:61247/123‑1 ATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCCTGGTTACAATGTGTATGTGATGGGCGAGCCCGGCACCGGGCGCTTCTGGTTC > 4:289678/1‑110 ATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCCTGGTTACAATGTGTATGTGATGGGCGAGCCCGGCACCGGGCGCTTCTCGTTC < 3:289678/110‑1 AACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCCTGGTTACAATGTGTATGTGATGGGCGAGCCCGGCACCGGGCGCTTCTCGTTCGTCAAGCGCTACCTCAAGGCCGAGGGCAAGCGCCAGCAGACCCC > 7:18517/1‑149 AACAGCACGTTCCTGGTTACAATGTGTATGTGATGGGCGAGCCCGGCACCGGGCGCTTCTCGTTCGTCAAGCGCTACCTCAAGGCCGAGGGCAAGCGCCAGCAGACCCCGGCCGACTGGGTCTACGTCAACCACTTCGACGACACCC < 8:18517/147‑1 GTTACAATGTGTATGTGATGGGCGAGCCCGGCACCGGGCGCTTCTCGTTCGTCAAGCGCTACCTCAAGGCCGAGGGCAAGCGCCAGCAGACCCCGGCCGACTGGGTCTACGTCAACCACTTCGACGACACCCGTGAACCACGTGCACTG < 1:100339/149‑1 GTCGGCCGGGGTCTGCTGGCGCTTGCCCTCGGCCTTGAGGTAGCGCTTGACGAACGAGAAGCGCCCGGTGCCGGGCTCGCCCATCACATACACATTGTAACCAGGACGCGGCATGGCCACGCCAAACTGCAGGGCCTCAACAGCACGTTCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/794134‑793981‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcctggTTACAATGTGTATGTGATGGGCGAGCCCGGCACCGGGCGCTTCTCGTTCGTCAAGCGCTACCTCAAGGCCGAGGGCAAGCGCCAGCAGACCCCGGCCGACTGGGTCTACGTCAACCACTTCGACGACACCCGTGAACCACGTGCACTG > NC_002947/794035‑794182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |