New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1152581 = | 50 (0.880) | 4 (0.070) | 3/250 | NT | 8.0% | coding (1306/1827 nt) | edd | phosphogluconate dehydratase |
? | NC_002947 | 1152619 = | 44 (0.800) | coding (1344/1827 nt) | edd | phosphogluconate dehydratase |
CGGCATGCCATTGCAGCGCGGGCCCTGGAAGCGCACCACCGCGACAAAGTCACGCTCCAGCTCACCGGCCTTGAACGCATCGGCCAGCGACTGCTGGTCCTGGAACACCCGCGCCGGGGCCTCGACCACCTGGTGCTCGGGGGCGACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1152730‑1152581 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcGCGGGTGTTCCAGGACCAGCAGTCGCTGGCCGATGCGTTCAAGGCCGGTGAGCTGGAGCGTGACTTTGTCGCGGTGGTGCGCTTCCAGGGCCCGCGCTGCAATGGCATGCCGGAACTGCACAAGCTCACCCCGTTCCTCGGTGTAT > NC_002947/1152619‑1152764 CGGCATGCCATTGCAGCGCGGGCCCTGGAAGCGCACCACCGCGACAAAGTCACGCTCCAGCTCACCGGCCTTGAACGCATCGGCCAGCGACTGCTGGTCCTGGAACACCCGCGCCGGGGCCTCGACCACCTGGTGCTCGGGGGCGACGG < 3:154230/149‑1 CGGCATGCCATTGCAGCGCGGGCCCTGGAAGCGCACCACCGCGACAAAGTCACGCTCCAGCTCACCGGCCTTGAACGCATCGGCCAGCGACTGCTGGTCCTGGAACACCCGCGCCGGGGCCTCGACCACCTGGTGCTCGGGGGCGACGG > 3:173289/1‑149 CATGCCATTGCAGCGCGGGCCCTGGAAGCGCACCACCGCGACAAAGTCACGCTCCAGCTCACCGGCGTTGAACGCATCGGCCAGCGACAGCTGGTCCTGGAACACCCGCGCCGGCTCCTCGACCACCTCGTGCACGCGGGCGACGG > 4:52277/1‑146 GCCGGGGCCTCGACCACCTGGTGCTCGGGGGCGACGGCGCGGGTGTTCCAGGACCAGCAGTCGCTGGCCGATGCGTTCAAGGCCGGTGAGCTGGAGCGTGACTTTGTCGCGGTGGTGCGCTTCCAGGGCCCGCGCTGCAATG > 7:278467/1‑142 GCCGGGGCCTCGACCACCTGGTGCTCGGGGGCGACGGCGCGGGTGTTCCAGGACCAGCAGTCGCTGGCCGATGCGTTCAAGGCCGGTGAGCTGGAGCGTGACTTTGTCGCGGTGGTGCGCTTCCAGGGCCCGCGCTGCAATG < 8:278467/142‑1 CCGGGGCCTCGACCACCTGGTGCTCGGGGGCGACGGCGCGGGTGTTCCAGGACCAGCAGTCGCTGGCCGATGCGTTCAAGGCCGGTGAGCTGGAGCGTGACTTTGTCGCGGTGGTGCGCTTCCAGGGCCCGCGCTGCAATGGCATGCCG > 4:62114/1‑149 CCGGGGCCTCGACCACCTGGTGCTCGGGGGCGACGGCGCGGGTGTTCCAGGACCAGCAGTCGCTGGCCGATGCGTTCAAGGCCGGTGAGCTGGAGCGTGACTTTGTCGCGGTGGTGCGCTTCCAGGGCCCGCGCTGCAATGGCATGCCG > 6:85579/1‑149 GGCGACGGCGCGGGTGTTCCAGGACCAGCAGTCGCTGGCCGATGCGTTCAAGGCCGGTGAGCTGGAGCGTGACTTTGTCGCGGTGGTGCGCTTCCAGGGCCCGCGCTGCAATGGCATGCCGGAACTGCACAAGCTCACCCCGTTCCTCG < 3:62114/149‑1 GGCGCGGGTGTTCCAGGACCAGCAGTCGCTGGCCGATGCGTTCAAGGCCGGTGAGCTGGAGCGTGACTTTGTCGCGGTGGTGCGCTTCCAGGGCCCGCGCTGCAATGGCATGCCGGAACTGCACAAGCTCACCCCGTTCCTCGGTGTAT < 5:162468/149‑1 CGGCATGCCATTGCAGCGCGGGCCCTGGAAGCGCACCACCGCGACAAAGTCACGCTCCAGCTCACCGGCCTTGAACGCATCGGCCAGCGACTGCTGGTCCTGGAACACCCGCGCCGGGGCCTCGACCACCTGGTGCTCGGGGGCGACGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1152730‑1152581 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcGCGGGTGTTCCAGGACCAGCAGTCGCTGGCCGATGCGTTCAAGGCCGGTGAGCTGGAGCGTGACTTTGTCGCGGTGGTGCGCTTCCAGGGCCCGCGCTGCAATGGCATGCCGGAACTGCACAAGCTCACCCCGTTCCTCGGTGTAT > NC_002947/1152619‑1152764 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |