| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2766947 = | 57 (1.010) | 4 (0.070) | 4/250 | NT | 6.4% | coding (1773/2187 nt) | PP_2420 | ferric siderophore receptor |
| ? | NC_002947 | 2766974 = | 61 (1.110) | coding (1746/2187 nt) | PP_2420 | ferric siderophore receptor | |||||
GCAGCGCTTTTGGGAGGGACGTGGCGAATGGACGCTTGCCGCCTACCACATCGTCAAGAAAAAGCTGCTGGTGGACGACCCGATCACGCACGAGAAGCAACAAGCCGGGCAGCAGACCTCCGATGGCCTGGAAGCGACGCTGGAACTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2767097‑2766947‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccATCGGAGGTCTGCTGCCCGGCTTGTTGCTTCTCGTGCGTGATCGGGTCGTCCACCAGCAGCTTTTTCTTGACGATGTGGTAGGCGGCAAGCGTCCATTCGCCACGTCCCTCCCAAAAGCGCTGCTTGAGGCCTGCCTCGGTCTGCT > NC_002947/2766974‑2767119 GCAGCGCTTTTGGGAGGGACGTGGCGAATGGACGCTTGCCGCCTACCACATCGTCAAGAAAAAGCTGCTGGTGGACGACGCGATCACGCACGAGAAGCAACAAGCCTGGCAGCAGACCTCCGATGGCCTGGAAGCGACGCTGGAACTGG < 5:220825/149‑1 ACCTCCGATGGCCTGGAAGCGACGCTGGAACTGGCCATCGGAGGTCTGCTGCCCGGCTTGTTGCTTCTCGTGCGTGATCGGGTCGTCCACCAGCAGCTTTTTCTTGA < 5:251937/107‑1 ACCTCCGATGGCCTGGAAGCGACGCTGGAACTGGCCATCGGAGGTCTGCTGCCCGGCTTGTTGCTTCTCGTGCGTGATCGGGTCGTCCACCAGCAGCTTTTTCTTGA > 6:251937/1‑107 GATGGCCTGGAAGCGACGCTGGAACTGGCCATCGGAGGTCTGCTGCCCGGCTTGTTGCTTCTCGTGCGTGATCGGGTCGTCC < 5:135173/82‑1 GATGGCCTGGAAGCGACGCTGGAACTGGCCATCGGAGGTCTGCTGCCCGGCTTGTTGCTTCTCGTGCGTGATCGGGTCGTCC > 6:135173/1‑82 GCCATCGGAGGTCTGCTGCCCGGCTTGTTGCTTCTCGTGCGTGATCGGGTCGTCCACCAGCAGCTTTTTCTTGACGATGTGGTAGGCGGCAAGCGTCCATTCGCCACGTCCCTCCCAAAAGCGCAGCTTGAGGCCTGGCTCGGTCTGCT > 8:76159/1‑149 GCAGCGCTTTTGGGAGGGACGTGGCGAATGGACGCTTGCCGCCTACCACATCGTCAAGAAAAAGCTGCTGGTGGACGACCCGATCACGCACGAGAAGCAACAAGCCGGGCAGCAGACCTCCGATGGCCTGGAAGCGACGCTGGAACTGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2767097‑2766947‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccATCGGAGGTCTGCTGCCCGGCTTGTTGCTTCTCGTGCGTGATCGGGTCGTCCACCAGCAGCTTTTTCTTGACGATGTGGTAGGCGGCAAGCGTCCATTCGCCACGTCCCTCCCAAAAGCGCTGCTTGAGGCCTGCCTCGGTCTGCT > NC_002947/2766974‑2767119 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |