New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2942726	54 (0.960)	4 (0.070)	4/248	NT	6.9%	intergenic (‑527/‑846)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B
	?	NC_002947	= 2942756	56 (1.030)					intergenic (‑557/‑816)	PP_2575/PP_2577	hypothetical protein/paraquat‑inducible protein B

CGTGCAGATCCTCAGTCACGGCAGTATCACCTTCATCGCTCTGGTCATGGCGCTGTCGATCATTTTTGCGCCGCTGCTGCAAATTGCCCTGTTGTGCTGGGTGTTGGGTTTTGCCCTTGCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2942601‑2942726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGCAAGGGCAAAACCCAACACCCAGCACAACAGGGCAATTTGCAGCAGCGGCGCAAAAATGATCGACAGCGCCATGACCAGAGCGATGAAGGTGATACTGCCGTGACTGAGGA  <  NC_002947/2942756‑2942609                                                                                                                                                                                                                                                                                    CGTGCAGATCCTCAGTCACGGCAGTATCACCTTCATCGCTCTGGTCATGGCGCTGTCGATCATTTTTGCGCCGCTGCTGCAAATTGCCCTGTTGTGCTGGGTGTTGGGTTTTGCCCTTGCCGGCCACGCATGCACAGGGCAAAGCCGGG                                                                                                                               >  6:58410/1‑149                  ACGGCAGTATCACCTTCATCGCTCTGGTCATGGCGCTGTCGATCATTTTTGCGCCGCTGCTGCAAATTGCCCTGTTGTGCTGGGTGTTGGGTTTTGCCCTTGCCGGCCACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGCAA                                                                                                              <  5:58410/149‑1                  ACGGCAGTATCACCTTCATCGCTCTGGTCATGGCGCTGTCGATCATTTTTGCGCCGCTGCTGCAAATTGCCCTGTTGTGCTGGGTGTTGGGTTTTGCCCTTGCCGGCCACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGC                                                                                                                >  4:172573/1‑147                     GCAGTATCACCTTCATCGCTCTGGTCATGGCGCTGTCGATCATTTTTGCGCCGCTGCTGCAAATTGCCCTGTTGTGCTGGGTGTTGGGTTTTGCCCTTGCCGGCCACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGCAAGGG                                                                                                           <  3:172573/149‑1                                                                                                                          GGCCACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGCAAGGGCAAAACCCAACACCCAGCACAACAGGGCAATTTGCAGCAGCGGCGCAAAAATGATCGACAGCGCCATGACCAGAGCGATGAAGGTGATACTGCCGTGACTG      <  7:27442/149‑1                                                                                                                              ACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGCAAGGGCAAAACCCAACACCCAGCACAACAGGGCAATTTGCAGCAGCGGCGCAAAAATGATCGACAGCGCCATGACCAGAGCGATGAAGGTGATACTGCCGTGACTGAGGA  >  2:63280/1‑149                                                                                                                              ACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGCAAGGGCAAAACCCAACACCCAGCACAACAGGGCAATTTGCAGCAGCGGCGCAAAAATGATCGACAGCGCCATGACCAGAGCGATGAA                         >  3:15671/1‑126                                                                                                                              ACGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGCAAGGGCAAAACCCAACACCCAGCACAACAGGGCAATTTGCAGCAGCGGCGCAAAAATGATCGACAGCGCCATGACCAGAGCGATGAA                         <  4:15671/126‑1                                                                                                                                                                                                                                                                                    CGTGCAGATCCTCAGTCACGGCAGTATCACCTTCATCGCTCTGGTCATGGCGCTGTCGATCATTTTTGCGCCGCTGCTGCAAATTGCCCTGTTGTGCTGGGTGTTGGGTTTTGCCCTTGCCGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2942601‑2942726 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccaCGCATGCACAGGGCAAAGCCGGGGGCACGCTGGCCGGCAAGGGCAAAACCCAACACCCAGCACAACAGGGCAATTTGCAGCAGCGGCGCAAAAATGATCGACAGCGCCATGACCAGAGCGATGAAGGTGATACTGCCGTGACTGAGGA  <  NC_002947/2942756‑2942609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.