New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3131512	69 (1.220)	4 (0.070)	4/252	NT	5.4%	coding (391/801 nt)	PP_2748	ABC transporter ATP‑binding protein
	?	NC_002947	= 3131556	74 (1.340)					coding (435/801 nt)	PP_2748	ABC transporter ATP‑binding protein

CAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3131407‑3131512 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacCTGCTCGGCGCGCTCGGCAAA‑AGCCCGGGCCTCGCGCCGGGCACGTGGCAG  <  NC_002947/3131556‑3131506                                                                                                                                                                CAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACGTGCTCGGCGCGCTCGGCAAA‑AGCCCGGGCCTCGCGCCGGGCA          <  8:95302/149‑1        ATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACCTGCTCGGCGCGCTCGGCAAA‑AGCCCGGGCCTCGCGCCGGGCACGTGGCA   <  3:177846/149‑1                  CAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACCTGCTCGGCGCGCTCGGCAAACAGCCCGGGCCTCGCGCCGGGCACGTGGCAG  <  1:32704/141‑1                  CAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCACCTGCTCGGCGCGCTCGGCAAA‑AGCCCGGGCCTCGCGCCGGGCACGTGGCAG  >  2:32704/1‑140                     GAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCC                                                        <  2:62230/84‑1                                                                    AGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCAC                                                      >  5:207770/1‑39                                                                    AGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCAC                                                      <  6:207770/39‑1                                                                                                                                                                CAGAACAATGCGCTGTTCAAGAAGATGAGTGTGCTGGACAACCTGCTCACCGGTCTGTCGCGTTTCCAGCGCAGTTACTTTCTCGAACAGGCCCTGGGCCTGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3131407‑3131512 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacCTGCTCGGCGCGCTCGGCAAA‑AGCCCGGGCCTCGCGCCGGGCACGTGGCAG  <  NC_002947/3131556‑3131506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.