New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3253088	59 (1.040)	5 (0.090)	4/242	NT	8.1%	coding (354/729 nt)	PP_2851	hypothetical protein
	?	NC_002947	= 3253135	58 (1.090)					coding (307/729 nt)	PP_2851	hypothetical protein

CCTCATACGGCTCATAGTTGTACTGCCGCTGGCCTTCGCTGCCGACACTGACGCCAAAGTCCTCGTTGAAGTCGCTGCCATGCGACGAATACCACGGGAACTGCCAGCCCATGCGCTGGCGAAATGCCTGGAATTCGGCATACGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3252940‑3253088 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgccAATCTGCACCTGGCCCACCACGATGTGTCGCTGGTGGCGGTGTCACGGGCGCCGTATGCCGAATTCCAGGCATTTCGCCAGCGCATGGGCTGGCAGTTCCCGTGGTATTCGTCGCATGGCAGCGACTTCAACGAGGACTTTGGCGTCA  <  NC_002947/3253135‑3252988                                                                                                                                                                                                                                                                                                           CCTCATACGGCTCATAGTTGTACTGCCGCTGGCCTTCGCTGCCGAAACTGCCGCCAAAGTCCTCGTTGAAGTCGCTGCCATGCGACGAATACCACGGGAACTGCAAGCCCATTCGCTGGCGAAATGCCTGGAATTCGGCATACGGatcc                                                                                                                                                      >  7:115433/1‑145                                                       CAAAGTCCTCGTTGAAGTCGCTGCCATGCGACGAATACCACGGGAACTGCCAGCCCATGCGCTGGCGAAATGCCTGGAATTCGGCATACGGCGCCAATCTGCAACTGGCCCACCACGATGTGTCGCTGCTGGCGGTGTCACGGGCGC                                                                                                  >  3:244290/1‑147                                                         AAGTCCTCGTTGAAGTCGCTGCCATGCGACGAATACCACGGGAACTGCCAGCCCATGCGCTGGCGAAATGCCTGGAATTCGGCATACGGCGCCAATCTGCACCTGGCCCACCACGATGTGTCGCTGGTGGCGGTGTCACGGGCGCCGTA                                                                                              >  7:173709/1‑149                                                         AAGTCCTCGTTGAAGTCGCTGCCATGCGACGAATACCACGGGAACTGCCAGCCCATGCGCTGGCGAAATGCCTGGAATTCGGCATACGGCGCCAATCCGCACCTGGCCCACCACGATGTGTCGCTGGTGGCGGTGTCACGGGCGCCGT                                                                                               <  1:318756/148‑1                                                         AAGTCCTCGTTGAAGTCGCTGCCATGCGACGAATACCACGGGAACTGCCAGCCCATGCGCTGGCGAAATGCCTGGAATTCGGCATACGGCGCCAATCCGCACCTGGCCCACCACGATGTGTCGCTGGTGGCGGTGTCACGGGCGCCGT                                                                                               >  2:318756/1‑148                                                          AGTCCTCGTTGAAGTCGCTGCCATGCGACGAATACCACGGGAACTGCCAGCCCATGCGCTGGCGAAATGCCTGGAATTCGGCATACGGCGCCAATCTGCACCTGGCCCACCACGATGTGTCGCTGGTGGCGGTGTCACGGGCGCCGTAT                                                                                             <  8:173709/149‑1                                                                                                                                                GGCGCCAATCTGCACCTGGCCCACCACGATGTGTCGCTGGTGGCGGTGTCACGGGCGCCGTATGCCGAATTCCAGGCATTTCGCCAGCGCATGGGCTGGCAGTTCCCGTGGTATTCGTCGCATGGCAGCGACTTCAACGAGGACTTTGG       <  4:244745/149‑1                                                                                                                                                     CAATCTGCACCTGGCCCACCACGATGTGTCGCTGGTGGCGGTGTCACGGGCGCCGTATGCCGAATTCCAGGCATTTCGCCAGCGCATGGGCTGGCAGTTCCCGTGGTATTCGTCGCATGGCAGCGACTTCAACGAGGACTTTGGCGTCA  <  3:147835/149‑1                                                                                                                                                                                                                                                                                                           CCTCATACGGCTCATAGTTGTACTGCCGCTGGCCTTCGCTGCCGACACTGACGCCAAAGTCCTCGTTGAAGTCGCTGCCATGCGACGAATACCACGGGAACTGCCAGCCCATGCGCTGGCGAAATGCCTGGAATTCGGCATACGGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3252940‑3253088 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acggcgccAATCTGCACCTGGCCCACCACGATGTGTCGCTGGTGGCGGTGTCACGGGCGCCGTATGCCGAATTCCAGGCATTTCGCCAGCGCATGGGCTGGCAGTTCCCGTGGTATTCGTCGCATGGCAGCGACTTCAACGAGGACTTTGGCGTCA  <  NC_002947/3253135‑3252988

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.