New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3796316 =	58 (1.030)	4 (0.070)	4/246	NT	6.9%	coding (138/1884 nt)	fcs	feruloyl‑CoA‑synthetase
	?	NC_002947	3796400 =	52 (0.960)					coding (54/1884 nt)	fcs	feruloyl‑CoA‑synthetase

ACAAGGAGCAACCTGCGTGAATAACGAAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3796469‑3796316 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGC  >  NC_002947/3796400‑3796545                                                                                                                                                                                                                                                                                                              ACAAGGAGCAACCTGCGTGAATAACGAAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCAC                                                                                                                                                         >  6:18421/1‑149     GGAGCAACCTGCGTGAATAACGAAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGC                                                                                                                                                     >  1:18498/1‑149                                                                 CGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGG                                                                                         >  7:308226/1‑149                                                                       CGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTC                                                                                   >  2:38737/1‑149                                                                           AGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTG                                                                               <  1:38737/149‑1                                                                              TGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTC                                                                            <  8:308226/149‑1                                                                                                                                                       GGCGGTAGCGCGGACGTTGGCCAGGGGCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGAGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGG   <  4:239593/149‑1                                                                                                                                                         CGGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGC  >  1:248064/1‑148                                                                                                                                                                                                                                                                                                              ACAAGGAGCAACCTGCGTGAATAACGAAGCCCGCTCAGGGTCGACCGACCCTGGCCAACGTCCGCGCTACCGCCAGGTGGCCATCGGGCATCCCCAGGTGCAGGTCAGTCACGTCGACGACGTGCTGCGCATGCAACCTGTCGAGCCACTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3796469‑3796316 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcgGTAGCGCGGACGTTGGCCAGGGTCGGTCGACCCTGAGCGGGCTTCGTTATTCACGCAGGTTGCTCCTTGTTCTTGTTGTACATCCTGCCGCCGCCCGATATGACGGGGCGGCGGTCATCTTGCCGGAGGTCTGGGCCTGCCGCGGC  >  NC_002947/3796400‑3796545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.