| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3931751 = | 53 (0.940) | 3 (0.060) | 3/246 | NT | 5.9% | coding (27/678 nt) | PP_5604 | subtilisin‑like serine protease |
| ? | NC_002947 | 3931845 = | 45 (0.830) | coding (1632/1710 nt) | PP_3466 | ABC transporter permease/ATP‑binding protein | |||||
GACCAGCTGTTCGCCGGCCGCACGCGCATCCTGATCAGCCACCGGGCTTCGACCCTGGCCGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3931904‑3931751‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGCGAACAGCTGGTCGATGGCCGCGATCACTTCACGCTCGGTGGCCTCATCCACTGCCGAAGTGGCCTCGTCCAGCACCAGGATCGCCGGGGCCTGCAACA > NC_002947/3931845‑3931990 GACCAGCTGTTCGCCGGCCGCACGCGCATCCTGATCAGCCACCGGGCTTCGACCCTGGCCGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTG < 4:11846/149‑1GACCAGCTGTTCGCCGGCCGCACGCGCATCCTGATCAGCCACCGGGCTTCGACCCTGGCCGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTG < 7:301857/149‑1 ACCAGCTGTTCGCCGGCCGCACGCGCATCCTGATCAGCCACCGGGCTTCGACCCTGGCCGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTGG > 2:149155/1‑149 CCAGCTGTTCGCCGGCCGCACGCGCATCCTGATCAGCCACCGGGCTTCGACCCTGGCCGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAATCATGGGCACTGACGTGCGCGTTGGC < 4:353005/149‑1 AGCTGTTCGCCGGCCGCACGCGCATCCTGATCAGCCGCCGGGCTTCGACCCTGGCCGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTGGCAT < 7:11585/149‑1 CTGGCCGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTGGCATCGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGC > 2:3495/1‑148 CGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTGGCATCGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGCGAACAG > 3:195378/1‑149 CAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTGGCATCGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGCGAACAGCTGGTCGATGGCCGCGATCACTTCACGCTCGGTGGCCTC < 1:3495/148‑1 GGCATCGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGCGAACAGCTGGTCGATGGCCGCGATCACTTCACGCTCGGTGGCCTCATCCACTGCCGAAGTGGCCTCGTCCAGCACCAGGATCGCCGGGGCCTGC > 4:198286/1‑148 GCATCGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGCGAACAGCTGGTCGATGGCCGCGATCACTTCACGCTCGGTGGCCTCATCCACTGCCGAAGTGGCCTCGTCCAGCACCAGGATCGCCGGGGCCTGCAA < 4:195378/149‑1 CATCGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGCGAACAGCTGGTCGATGGCCGCGATCACTTCACGCTCGGTGGCCTCATCCACTGCCGAAGTGGCCTCGTCCAGCACCAGGATCGCCGGGGCCTGCAAC < 8:301857/149‑1 ATCGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGCGAACAGCTGGTCGATGGCCGCGATCACTTCACGCTCGGTGGCCTCATCCACTGCCGAAGTGACCTCGTCCAGCACCAGGATCGCCGGGGCCTGCAACA > 8:333865/1‑149 GACCAGCTGTTCGCCGGCCGCACGCGCATCCTGATCAGCCACCGGGCTTCGACCCTGGCCGATGCCGACCTGCAGCTGCAACTGCATGACGGCCAGTTGCAGGTACTGGCGCAGGAGGTGATCAAACATGGGCACTGACGTGCGCGTTGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3931904‑3931751‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcatcGGCCAGGGTCGAAGCCCGGTGGCTGATCAGGATGCGCGTGCGGCCGGCGAACAGCTGGTCGATGGCCGCGATCACTTCACGCTCGGTGGCCTCATCCACTGCCGAAGTGGCCTCGTCCAGCACCAGGATCGCCGGGGCCTGCAACA > NC_002947/3931845‑3931990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |