New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4771453 = | 56 (0.990) | 3 (0.060) | 3/242 | NT | 5.7% | coding (7814/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
? | NC_002947 | 4771492 = | 46 (0.870) | coding (7775/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
GGCGCGCCTGGGCAACCTCGGGCTGCTGCCCGGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4771491‑4771453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgccTGGCCGTCCAGCGACAGCGCCTGCAGCAGCGCCTCCATGTTGGCGCGAATGCCCGCCACCGCTTCCTCGCTGAAGCACTGGCGCAGGTACATGTACTCGATGATCAACTGGTCTTCGACGATGACCATCAGGTCCATCGGGAAGTCG > NC_002947/4771492‑4771638 GGCGCGCCTGGGCAACCTCGGGCTGCTGCCCGGCGCGCCTGGCCGTCCAGCGACAGCGCCTGCAGCAGCGCCTCCATGTTGGCGCGAATGCCCGCCACCGCTTCCTCGCTGAAGCACTGGCGCAGGTACATGTACTCGATGATCAACTG > 4:294408/1‑149 GCCTGGGCAACCTCGGGCTGCTGCCCGGCGCGCCTGGCCGTCCAGCGACAGCGCCTGCAGCAGCGCCTCCATGTTGGCGCGAATGCCCGCCACCGCTTCCTCGCTGAAGCACTGG > 7:200076/1‑115 GCCTGGGCAACCTCGGGCTGCTGCCCGGCGCGCCTGGCCGTCCAGCGACAGCGCCTGCAGCAGCGCCTCCATGTTGGCGCGAATGCCCGCCACCGCTTCCTCGCTGAAGCACTGG < 8:200076/115‑1 GCGCCTGGCCGTCCAGCGACAGCGCCTGCAGCAGCGCCTCCATGTTGGCGCGAATGCCCGCCACCGCTTCCTCGCTGAAGCACTGGCGCAGGTACATGTACTCGATGATCAACTGGTCTTCGACGATGACCATCAGGTCCATCGGGAAG > 2:152758/1‑149 GCGCCTGGAAGTCCAGCGACAGCGACTGCAGCAGCGCCTCCATGTTGGCGCGAATTACCGCCACCGCTTCCTCGCTGAAGCACTCGCGCAGGTACATGTACTCGATGATCAACTGGTCTTCGACGATGACCATCAGATCCATCAGGAAG > 4:116191/1‑149 CCTGGCCGTCCAGCGACAGCGCCTGCAGCAGCGCCTCCATGTTGGCGCGAATGCCCGCCACCGCTTCCTCGCTGAAGCACTGGCGCAGGTACATGTACTCGATGATCAACTGGTCTTCGACGATGACCATCAGGTCCATCGGGAAGTCG < 1:18773/149‑1 GGCGCGCCTGGGCAACCTCGGGCTGCTGCCCGGCGCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4771491‑4771453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgcgccTGGCCGTCCAGCGACAGCGCCTGCAGCAGCGCCTCCATGTTGGCGCGAATGCCCGCCACCGCTTCCTCGCTGAAGCACTGGCGCAGGTACATGTACTCGATGATCAACTGGTCTTCGACGATGACCATCAGGTCCATCGGGAAGTCG > NC_002947/4771492‑4771638 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |