New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4828828 =49 (0.870)5 (0.090) 5/246 NT 9.4% coding (2362/12954 nt) pvdL non‑ribosomal peptide synthetase
?NC_002947 4828857 = 50 (0.930)coding (2333/12954 nt) pvdL non‑ribosomal peptide synthetase

CAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4828981‑4828828
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctggGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGCGGCTGCTGCGGCAGGATACGCTG  >  NC_002947/4828857‑4828972
                                                                                                                                                                                                                                                                              
CAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAAC                                                                                                                           <  1:163930/149‑1
 AGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACC                                                                                                                          >  4:24732/1‑149
                                                                                                                   TCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGC                                  >  7:76666/1‑123
                                                                                                                   TCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGC                                  <  8:76666/123‑1
                                                                                                                     cACCTCCCCCCGGGGCCGCTGTGGGGGGTAACCGTGGGTTTGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGCGGCTGCTG                 <  2:303365/137‑1
                                                                                                                     GACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGCGGCTGCTG                 >  1:303365/1‑138
                                                                                                                         TCACCCAGGGGCCGCTGTTGCGGGTAACCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGAGGCTGCTGCGGCAGGATACGCTG  >  2:313484/1‑149
                                                                                                                                                                                                                                                                              
CAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4828981‑4828828
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctggGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGCGGCTGCTGCGGCAGGATACGCTG  >  NC_002947/4828857‑4828972

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.