New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4828828 = | 49 (0.870) | 5 (0.090) | 5/246 | NT | 9.4% | coding (2362/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
? | NC_002947 | 4828857 = | 50 (0.930) | coding (2333/12954 nt) | pvdL | non‑ribosomal peptide synthetase |
CAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4828981‑4828828 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctggGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGCGGCTGCTGCGGCAGGATACGCTG > NC_002947/4828857‑4828972 CAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAAC < 1:163930/149‑1 AGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACC > 4:24732/1‑149 TCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGC > 7:76666/1‑123 TCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGC < 8:76666/123‑1 cACCTCCCCCCGGGGCCGCTGTGGGGGGTAACCGTGGGTTTGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGCGGCTGCTG < 2:303365/137‑1 GACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGCGGCTGCTG > 1:303365/1‑138 TCACCCAGGGGCCGCTGTTGCGGGTAACCCTGGGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGAGGCTGCTGCGGCAGGATACGCTG > 2:313484/1‑149 CAGGCGCTGCAGCGTATCCTGCCGCAGCAGCCGCTCAGCCTGCACCGCCTGGACCTTGAAGGGCACTCGCCCGAGCAGGTTGCCGCGCAGCGTGAAACCGAGGCCCGCCAGCCGTTCGACCTCACCCAGGGGCCGCTGTTGCGGGTAACCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4828981‑4828828 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccctggGTGAGGTCGAACGGCTGGCGGGCCTCGGTTTCACGCTGCGCGGCAACCTGCTCGGGCGAGTGCCCTTCAAGGTCCAGGCGGTGCAGGCTGAGCGGCTGCTGCGGCAGGATACGCTG > NC_002947/4828857‑4828972 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |