| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4996793 = | 41 (0.730) | 5 (0.090) | 5/250 | NT | 11.7% | coding (1183/1380 nt) | lpdV | branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase |
| ? | NC_002947 | 4996829 = | 36 (0.660) | coding (1219/1380 nt) | lpdV | branched‑chain alpha‑keto acid dehydrogenase complex dihydrolipoyl dehydrogenase | |||||
GCTTCACCGAGCGTTGGGTGGGCATGAATGGTACCGGCCACATCTTCCAGGCACGCGCCCATCTCCAGCGATTGGGCAAACGCGGTGGATAGCTCGGAGACCGCCACGCCAACCGCCTGCCAACCCACGATCAGGTGGTTGTCACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4996941‑4996793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGAAGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGTGAAGCGGTACAGGAAGCCGCACTGCGCGCCCTGGGCCACG > NC_002947/4996829‑4996976 GCTTCACCGAGCGTTGGGTGGGCATGAATGGTACCGGCCACATCTTCCAGGCACGCGCCCATCTCCAGCGATTGGGCAAACGCGGTGGATAGCTCGGAGACCGCCACGCCAACCGCCTGCCAACCCACGATCAGGCGGTTGTCACGGCG > 2:7991/1‑149 GAATGGTACCGGCCACATCTTCCAGGCACGCGCCCATCTCCAGCGATTGGGCAAACGCGGTGGATAGCTCGGAGACCGCCACGCCAACCGCCTGCCAACCCACGATCAGGTGGTTGTCACGGC < 3:219094/123‑1 GAATGGTACCGGCCACATCTTCCAGGCACGCGCCCATCTCCAGCGATTGGGCAAACGCGGTGGATAGCTCGGAGACCGCCACGCCAACCGCCTGCCAACCCACGATCAGGTGGTTGTCACGGC > 4:219094/1‑123 CAACCGCCTGCCAACCCACGATCAGGTGGTTGTCACGGCGGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGAAGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGT > 6:224395/1‑148 ACCGCCTGCCACCCCACGATCAGGTGGTTGTCACGGCGGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGATGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGTG > 3:191866/1‑147 CCGCCTGCCAACCCACGATCAGGTGGTTGTCACGGCGGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGAAGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGTGAAG < 5:224395/149‑1 CGCCTGCCAACCCACGATCAGGTGGTTGTCACGGCGGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGAAGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGTGAAGC > 7:284277/1‑149 GGTGGTTGTCACGGCGGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGAAGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGTGAAGCGGTACAGGAAGCCGCACTGC < 8:284277/149‑1 CGGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGAAGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGTGAAGCGGTACAGGAAGCCGCACTGCGCGCCCTGGGCCAC < 2:100881/149‑1 GGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGAAGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGTGAAGCGGTACAGGAAGCCGCACTGCGCGCCCTGGGCCACG > 3:318292/1‑149 GCTTCACCGAGCGTTGGGTGGGCATGAATGGTACCGGCCACATCTTCCAGGCACGCGCCCATCTCCAGCGATTGGGCAAACGCGGTGGATAGCTCGGAGACCGCCACGCCAACCGCCTGCCAACCCACGATCAGGTGGTTGTCACGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4996941‑4996793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgGTTGGCGTGGCGGTCTCCGAGCTATCCACCGCGTTTGCCCAATCGCTGGAGATGGGCGCGTGCCTGGAAGATGTGGCCGGTACCATTCATGCCCACCCAACGCTCGGTGAAGCGGTACAGGAAGCCGCACTGCGCGCCCTGGGCCACG > NC_002947/4996829‑4996976 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |