| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5301090 = | 52 (0.920) | 3 (0.060) | 3/246 | NT | 5.8% | coding (2683/3675 nt) | recB | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease |
| ? | NC_002947 | 5301137 = | 47 (0.870) | coding (2636/3675 nt) | recB | Chi activated ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease | |||||
CTCAAGCGCGGTAATCTGAAGAGCTCGCAGCTGCACCGCTCGGCGTTTGGCTACCTGCTGGGGGGCGGCCTTGCCTTGGCTGGCTCGGCGCAGCTGACGGACTGGTTGCAGGCTTTGGCGGCAAGTTGCCCGCACATCACTTGCCCAGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5301243‑5301090‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGGGT > NC_002947/5301137‑5301282 CTCAAGCGCGGTAATCTGAAGAGCTCGCAGCTGCACCGCTCGGCGTTTGGCTACCTGCTGGGGGGCGGCCTTGCCTTGGCTGGCTCGGCGCAGCTGACGGACTGGTTGCAGGCTTTGGCGGCAAGTTGCCCGCACATCACTTGCCCAGG > 6:195564/1‑149 GGTTGCAGGCTTTGGCGGCAAGTTGCCCGCGCATCACTTGCCCAGGCCTGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTC < 3:339165/141‑1 GGTTGCAGGCTTTGGCGGCAAGTTGCCCGCGCATCACTTGCCCAGGCCTGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTC > 4:339165/1‑141 GTTGCAGGCTTTGGCGGCAAGTTGCCCGCACATCACTTGCCCAGGCCTGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCG > 4:289495/1‑149 CCTGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGG < 6:99634/149‑1 CTGCAGCCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGGG > 7:321473/1‑149 CTGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGGG < 3:208374/149‑1 CTGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGGG > 7:19527/1‑149 TGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGGGT > 8:1823/1‑149 TGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGG > 1:20125/1‑147 TGCAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGG < 2:20125/147‑1 CTCAAGCGCGGTAATCTGAAGAGCTCGCAGCTGCACCGCTCGGCGTTTGGCTACCTGCTGGGGGGCGGCCTTGCCTTGGCTGGCTCGGCGCAGCTGACGGACTGGTTGCAGGCTTTGGCGGCAAGTTGCCCGCACATCACTTGCCCAGGCCTGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5301243‑5301090‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctgcAACCAGTCCGTCAGCTGCGCCGAGCCAGCCAAGGCAAGGCCGCCCCCCAGCAGGTAGCCAAACGCCGAGCGGTGCAGCTGCGAGCTCTTCAGATTACCGCGCTTGAGGTCGGCGACACCCAGCCAGCAAGCATGCTGGGCGCGGGT > NC_002947/5301137‑5301282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |