| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5362551 = | 55 (0.970) | 3 (0.060) | 3/242 | NT | 5.3% | coding (1215/1341 nt) | glmM | phosphoglucosamine mutase |
| ? | NC_002947 | 5362607 = | 55 (1.040) | coding (1159/1341 nt) | glmM | phosphoglucosamine mutase | |||||
GGGCGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5362704‑5362551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggggtGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTTC > NC_002947/5362607‑5362700 GGGCGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGC < 1:282237/149‑1 CGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGG < 3:85809/149‑1 CGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGG > 4:159549/1‑149 GAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGG > 5:82654/1‑149 CTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGC > 2:170287/1‑148 CCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCGGGGCCTGACGGGCCTGGGCCAGGGTTTC < 5:91397/149‑1 CCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGTGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCGGGGCCTGACGGGCCTGGGCCAGGGTTTC > 6:91397/1‑149 GGGCGAAACCCTGGCCCAGGCCCGTCAGGCCCTGCGCAAGTGCCCGCAGGTGCTGATCAATGTGCGCTTTGGCGCCAGCAAGGTCGACCCGCTGGAGCACCCCGCCGTCAAGGAAGCCAGTGCCAAGGTTACCGAAGCGCTGGCGGGGCGGGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5362704‑5362551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggggtGCTCCAGCGGGTCGACCTTGCTGGCGCCAAAGCGCACATTGATCAGCACCTGCGGGCACTTGCGCAGGGCCTGACGGGCCTGGGCCAGGGTTTC > NC_002947/5362607‑5362700 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |