| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5492310 | 61 (1.080) | 4 (0.080) | 3/240 | NT | 6.9% | intergenic (‑111/+8) | PP_5716/cobJ | hypothetical protein/precorrin‑3B C17‑methyltransferase |
| ? | NC_002947 | = 5492336 | 52 (0.990) | coding (1680/1698 nt) | cobJ | precorrin‑3B C17‑methyltransferase | |||||
TCCGGCAGAACCTGAAGCTGCAGCTTCTCTTTATCGGTCGTCATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5492156‑5492310‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgctgGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGCAGATGAGGAACTGCTTCGTGGCAGATTGAGGTAAAGGTCACAGGTAGGTTTTCGGCTGGAGCTATTTGGCTCCAACCGTACCCTTCCTGGAGACCTTTCCCATGACGAC < NC_002947/5492336‑5492192 TCCGGCAGAACCTGAAGCTGCAGCTTCTCTTTATCGGTCGTCATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCC < 1:1974/149‑1TCCGGCAGAACCTGAAGCTGCAGCTTCTCTTTATCGGTCGTCATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCC > 7:259153/1‑149TCCGGCAGAACCTGAAGCTGCAGCTTCTCTTTATCGGTCGTCATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCC > 7:3745/1‑149 CCGGCAGAACCTGAAGCTGCAGCTTCTCTTTATCGGTCGTCATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACGTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCG > 2:332984/1‑149 GGCAGAACCTGAAGCTGCAGCTTCTCTTTATCGGTCGTCATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCGCG > 6:31360/1‑149 GCAGAACCTGAAGCTGCAGCTTCTCTTTATCGGTCGTCATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCGCGC > 4:106237/1‑149 ATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGG < 1:322715/148‑1 ATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGG < 2:336053/148‑1 GGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGC > 3:86764/1‑125 GGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGC < 4:86764/125‑1 taCCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGCAGATGAGGAACTGCTTCGTGGCAGATTGAGGTAAAGGTCACAGGTAGGTTTTCGGCTGGAGCTATTTGGCTCCAACCGTACCCTTCCTGGAGACCTTTCCC < 4:124270/146‑1 CCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGCAGATGAGGAACTGCTTCGTGGCAGATTGAGGTAAAGGTCACAGGTAGGTTTTCGGCTGGAGCTATTTGGCTCCAACCGTAC < 5:84979/126‑1 CCCGCGCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGCAGATGAGGAACTGCTTCGTGGCAGATTGAGGTAAAGGTCACAGGTAGGTTTTCGGCTGGAGCTATTTGGCTCCAACCGTAC > 6:84979/1‑126 GCTGGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGCAGATGAGGAACTGCTTCGTGGCAGATTGAGGTAAAGGTCACAGGTAGGTTTTCGGCTGGAGCTATTTGGCTCCAACCGTACCCTTCCTGGAGACCTTTCCCATGACGAC < 4:212598/149‑1 TCCGGCAGAACCTGAAGCTGCAGCTTCTCTTTATCGGTCGTCATGGGAAAGGTCTCCAGGAAGGGTACGGTTGGAGCCAAATAGCTCCAGCCGAAAACCTACCTGTGACCTTTACCTCAATCTGCCACGAAGCAGTTCCTCATCTGCCCGCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5492156‑5492310‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgcgctgGTATGGCGCAAAGCCGTAAGCGGCGGCAGCGCGGGCAGATGAGGAACTGCTTCGTGGCAGATTGAGGTAAAGGTCACAGGTAGGTTTTCGGCTGGAGCTATTTGGCTCCAACCGTACCCTTCCTGGAGACCTTTCCCATGACGAC < NC_002947/5492336‑5492192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |