| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1037771 = | 41 (0.730) | 3 (0.060) | 3/212 | NT | 9.0% | intergenic (+16/+100) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase |
| ? | NC_002947 | 1037849 = | 27 (0.580) | intergenic (+94/+22) | PP_0896/PP_0897 | carbon‑nitrogen hydrolase family protein/class 1 fumarate hydratase | |||||
CAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGC > NC_002947/1037627‑1037908 | gagcTGAACCCGGCCTGGAGCGAGTGGGTGGGGTGTGAGGTAGATTTGGATGATGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTc < 4:184965/147‑1 (MQ=255) gaagtcaaggacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTcgc > 8:20198‑M1/143‑148 (MQ=255) cTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCgg < 1:133347/149‑1 (MQ=255) agtcaaggacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCggg > 1:319523‑M1/141‑149 (MQ=255) gAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCggg > 6:106214/1‑148 (MQ=255) caaggacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCaa < 3:194108‑M1/12‑1 (MQ=255) aaggacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAg < 2:49677‑M1/13‑1 (MQ=255) aaggacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAg < 5:132710‑M1/13‑1 (MQ=255) aaggacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAg < 7:76947‑M1/13‑1 (MQ=255) gacatgccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGccc < 4:276338‑M1/16‑1 (MQ=255) aCTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGc > 7:7609/1‑149 (MQ=255) ccggtgaccgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGC‑Tcc > 2:148377‑M1/128‑148 (MQ=255) aGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑Tccc > 8:235197/1‑148 (MQ=255) gCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCa > 1:219360/1‑148 (MQ=255) gTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCCACCCCCCGCCCCAAATg > 5:56612/1‑149 (MQ=255) gTGGCTGGTGGGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGc > 3:113906/1‑149 (MQ=255) tGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCg > 5:21427/1‑149 (MQ=255) cgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGC‑Tc < 6:70103‑M1/20‑1 (MQ=255) cgtcgccgtggacagcaacggtgaatcggtacacatcactggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGC‑Tc > 5:70103‑M1/120‑139 (MQ=255) ggTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGcc > 5:110816/1‑149 (MQ=255) aGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGAGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCt > 6:25709/1‑149 (MQ=255) gTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCtt < 6:110816/148‑1 (MQ=255) tGGAGGACGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGAGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGt < 5:25709/148‑1 (MQ=255) gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTa > 4:261958/1‑127 (MQ=255) gaggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTa < 3:261958/127‑1 (MQ=255) aggaAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACgt < 8:7609/149‑1 (MQ=255) gTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTATGGCTTGCGCTGTACGgggggg > 3:238830/1‑149 (MQ=255) cggGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCggg < 5:159747/149‑1 (MQ=255) ggTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCt < 6:21427/149‑1 (MQ=255) ctggccctgccctgtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAACGGGCtt > 3:210195‑M1/82‑149 (MQ=255) gAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑GCCCAAATGCGTAGCCTTCTGGCTTGCGCTGGACGTGTGGGAGCGGGCGTGc > 8:197356/1‑149 (MQ=255) aGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGc < 1:313885/148‑1 (MQ=255) gCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTg > 8:202273/1‑115 (MQ=255) gggAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGcc < 5:280158/108‑1 (MQ=255) gggAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGcc > 6:280158/1‑108 (MQ=255) gggAAGGGCAGGGGTGTACCGGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCcgcg < 7:252671/149‑1 (MQ=255) ggccAGCTGTTCACCTGGCGGGACGGGCCGGCGCAGTTCGAGCGCGCCCTGTCCTCCCGGGGGCGGCCGCTTCCCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTCCTGGCTTGCGCTGTCCGGGTGGCCGCGGGCTTGCCCGCGAagca < 8:326965/146‑1 (MQ=255) gtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCggg < 5:196699‑M1/65‑1 (MQ=255) gtggcagagcaagattgccgaaagcctggccgtcgaagtgaagtaacctgatgtaactgcggcggctgCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCggg > 6:196699‑M1/69‑133 (MQ=255) ggCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCGTCTGGCGTGCGCTGTACGGGTGGGAGCGGGCTTGCCCGCGAagcag > 4:340028/1‑149 (MQ=255) tgtTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCAAAATGCGTAGCCTTCTGGGTTGCGCTGTACGTGTGGTAGCGGGCTTGCCCGCGAAGCAGccgccg < 4:113906/149‑1 (MQ=255) tttACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGGTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGccgccg > 5:160032/1‑147 (MQ=255) cTGGCGGGCCTGGCCGGAGCAGTCCGAGCGAGGCCGGGCATGACTGGGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTCGCCTTCTGGCTTGCGCTGTACGTGGGGCAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTAc < 7:235197/149‑1 (MQ=255) cGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTg > 2:355736/1‑85 (MQ=255) cGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTg < 1:355736/85‑1 (MQ=255) gCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTacttcacttc < 3:340028/149‑1 (MQ=255) gCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCCCCAAGCAGCCCCCGCAGTTACATCAGGGTacttcacttc > 3:55087/1‑149 (MQ=255) ttCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGGTGGACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACg > 4:54932/1‑149 (MQ=255) ttCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACg > 1:41957/1‑149 (MQ=255) ttCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAACCCGC‑TCCCAAATGCGTAGCCATCTGGCTTGCCCTGTAAGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCCCCGCAGTTACATCACGTTACTACACTTCGACg > 6:141893/1‑149 (MQ=255) gagagaGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGGGTAGCCTTATGGGTTGAGCGGTACGTGTGGGAGCGGGCTTTCCCGGGAAGCAGCCGCCGCAGTTACTAGAGGGTacttcgcttggcaggc > 8:133817/1‑141 (MQ=255) cTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGt < 8:78222/122‑1 (MQ=255) cTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGt > 7:78222/1‑122 (MQ=255) gatgaCTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCCAATGCGTAGCCTTCTGGCGTGCGCTGGACGTGTGGGAGCGGGCTTGCCCGCGCAGCCGCCGCCGCAGTTTCAGCAGGTTACTTCACTTCGCCGGCCAGGCTTTCgggca > 3:276338/1‑146 (MQ=255) tgtgGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGc > 6:132710/1‑149 (MQ=255) ctctTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGAc > 5:278263/1‑117 (MQ=255) | CAGCTGAACCCGGACTGCAGCCAGTGGCTGGTGTGTGAGGTAGATTTGGAGGAAGTGCGGCGGGTGAGGCGGGAAGGGCAGGTGTTTACCTGGCGGGACTGGCCGGAGCAGTTCGAGAGAGTCCTGTGATGACTGTGGCGGCCTCTTCGCGGGCAAGCCCGC‑TCCCAAATGCGTAGCCTTCTGGCTTGCGCTGTACGTGTGGGAGCGGGCTTGCCCGCGAAGCAGCCGCCGCAGTTACATCAGGTTACTTCACTTCGACGGCCAGGCTTTCGGCAATCTTGC > NC_002947/1037627‑1037908 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |