New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1214673 =	45 (0.800)	3 (0.060)	3/242	NT	5.8%	coding (2286/4305 nt)	PP_1061	ATP‑dependent DNA helicase
	?	NC_002947	1214749 =	55 (1.040)					coding (2210/4305 nt)	PP_1061	ATP‑dependent DNA helicase

TTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCGGCTGTTCAGG  >  NC_002947/1214529‑1214820                                                                                                                                                  |                                                                                                                                                    ttCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCt                                                                                                                                                 >  2:253967/1‑149 (MQ=255)  cgccagcgaggacgccatcgtgctgtcactgtcgaccagccacagtttcgagctggacgaagtgtggcgctacctgaacagccgcagcgccgagccgattctcatccaggccctgctcgatgcaccgctgtttggcgtgcgctggcgct                                                                                                                                                 >  2:339677‑M1/145‑149 (MQ=255)         ccATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgt                                                                                                                                         <  4:134620/149‑1 (MQ=255)          cATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTtgtg                                                                                                                                        <  2:104277/149‑1 (MQ=255)            tCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTTgc                                                                                                                                      <  6:315418/149‑1 (MQ=255)            tCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCACTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGgc                                                                                                                                      <  5:345267/149‑1 (MQ=255)              accacGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCAGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGgcgc                                                                                                                                    >  4:158176/5‑149 (MQ=255)               ccTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGgcgc                                                                                                                                    >  2:55844/1‑148 (MQ=255)                  cGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCAcc                                                                                                                                <  3:340265/149‑1 (MQ=255)                         gCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTc                                                                                                                         >  5:103252/1‑149 (MQ=255)                                tcgAGGGTTTGCTCGACCAGCGGATGGGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCca                                                                                                                   >  1:15038/1‑149 (MQ=255)                                   aGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGAGCTGGATTTGTGGCGCCACCTTGCGTCCGCCcaca                                                                                                                 >  3:284449/1‑147 (MQ=255)                                      gTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAgcg                                                                                                            <  6:103252/149‑1 (MQ=255)                                                 tcgagctggacgaagtgtggcgctacctgaacagccgcagcgccgagccgattctcatccaggccctgctcgatgcaccgctgtttggcgtgcgctgGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGc                                                                                                   <  1:165791‑M1/51‑1 (MQ=255)                                                  aGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCAt                                                                                                <  3:273128/149‑1 (MQ=255)                                                   gCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATg                                                                                               >  4:146561/1‑149 (MQ=255)                                                   gCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATg                                                                                               <  1:55844/149‑1 (MQ=255)                                                   gCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATg                                                                                               >  1:326718/1‑149 (MQ=255)                                                    cGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCCTCAGTGCCATgg                                                                                              >  6:253613/1‑149 (MQ=255)                                                       aT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCa                                                                                           >  4:269283/1‑149 (MQ=255)                                                           gTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGc                                                                                        <  2:326718/149‑1 (MQ=255)                                                              gggAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCt                                                                                      <  5:252841/148‑1 (MQ=255)                                                              gggAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCt                                                                                      <  2:15038/148‑1 (MQ=255)                                                              gggAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGCCAACAAGGTCCTCACTCTTAATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCAACTCCTg                                                                                     >  7:124105/1‑149 (MQ=255)                                                                      gctacctgaacagccgcagcgccgagccgattctcatccaggccctgctcgatgcaccgctgtttggcgtgcgctgGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTccag                                                                             >  7:75068‑M1/77‑149 (MQ=255)                                                                       ccGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTcca                                                                              <  2:151810/147‑1 (MQ=255)                                                                           tCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTccagcgc                                                                          >  1:66114/1‑147 (MQ=255)                                                                           ctgaacagccgcagcgccgagccgattctcatccaggccctgctcgatgcaccgctgtttggcgtgcgctgGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTccagcgcca                                                                        >  2:165791‑M1/72‑149 (MQ=255)                                                                               cGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTccagcgccagcg                                                                     >  3:263225/1‑148 (MQ=255)                                                                                ggCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCANCGCCAGCGCa                                                                   >  2:95981/1‑149 (MQ=255)                                                                                ggCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCa                                                                   >  2:91236/1‑149 (MQ=255)                                                                                   gATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCAGCTTGCGTCCGCCCTCAAAGCGCTGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGc                                                                <  5:253613/149‑1 (MQ=255)                                                                                            caggcaggCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGc                                                        <  5:3159/148‑1 (MQ=255)                                                                                            caggcaggCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCg                                                       <  7:146719/149‑1 (MQ=255)                                                                                             aggcaggcGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCgg                                                      >  5:21010/1‑149 (MQ=255)                                                                                                           gTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAg                                          <  4:263225/147‑1 (MQ=255)                                                                                                            tCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGc                                       <  6:122002/149‑1 (MQ=255)                                                                                                              aGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCt                                     >  5:327981/1‑149 (MQ=255)                                                                                                               gggAACACGGCGGCAACCAGGTCCTCACTCTTCATGCTCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCA‑GGCCTgg                                   <  4:14429/149‑1 (MQ=255)                                                                                                                 gAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGa                                  >  3:131244/1‑149 (MQ=255)                                                                                                                   acacGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGAt                                 >  6:7405/1‑148 (MQ=255)                                                                                                                    ctcggcggCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCTTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACTCCAAACAGCGGTGCATCGAGCAGGGCCTGGATga                               <  8:124105/147‑1 (MQ=255)                                                                                                                     acGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGAt                                 >  3:250580/1‑146 (MQ=255)                                                                                                                       ggcggcAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCCCGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGaa                            >  5:241/1‑149 (MQ=255)                                                                                                                              aCCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAAtcggctc                     <  3:282233/149‑1 (MQ=255)                                                                                                                                        cACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCgg           >  6:179217/1‑149 (MQ=255)                                                                                                                                         aCTCTTCATTCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTGCAGCTCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCgg           <  6:362405/148‑1 (MQ=255)                                                                                                                                         aCTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCGGc          <  4:303595/149‑1 (MQ=255)                                                                                                                                         aCTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCGGc          >  3:303595/1‑149 (MQ=255)                                                                                                                                           tctTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCGGCTg        >  1:8040/1‑149 (MQ=255)                                                                                                                                              tCATGCTCTGGATTTGTGGCGACACCTTGCGTCCTCCCAAAAAGCGCGGCATTGCCATGGCCACGCCTTCATTACAGCGCCAGCGCAATCCAAACATAGGTGCATCGATCAGGGCCTTGATGAGAATCGGCTCGGCGCTGCGGCTGtt      <  4:284449/148‑1 (MQ=255)                                                                                                                                                aTGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCGGCTGTTCAg   >  5:160279/1‑149 (MQ=255)                                                                                                                                                aTGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCGGCTGTTCAg   >  8:9837/1‑149 (MQ=255)                                                                                                                                                  GCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCCCGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCGGCTGTTCAgg  <  2:88586‑M1/148‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    TTCGCTGTCCATCGCCTCGTGCAGGCAATCGTCGAGGGTTTGCTCGACCAGCGGAT‑GGTCGGGAATCTGCCGCTCGCCGGCGATGTTCTCCAGGCAGGCGATCTGGTCAGGGAACACGGCGGCAACCAGGTCCTCACTCTTCATGCGCTGGATTTGTGGCGCCACCTTGCGTCCGCCCACAAAGCGCGGCAGTGCCATGGCCACGCCTGCATTCCAGCGCCAGCGCACGCCAAACAGCGGTGCATCGAGCAGGGCCTGGATGAGAATCGGCTCGGCGCTGCGGCTGTTCAGG  >  NC_002947/1214529‑1214820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.