New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1817932 =37 (0.650)4 (0.070) 4/246 NT 11.1% coding (74/789 nt) PP_1622 M23B subfamily metallopeptidase
?NC_002947 1817963 = 29 (0.540)coding (105/789 nt) PP_1622 M23B subfamily metallopeptidase

CGCGGGTGGGTCACACAGTCATTCGGCAGCGCAAGGACGGGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAGCTGGCTGCACGCAACGGCATTCAGGCGCCTTATACCA  >  NC_002947/1817785‑1818066
                                                                                                                                                   |                                                                                                                                      
ctgctggaaccgctgctgaaacgaatcgcttggcccgggcggatggtataaggcgcctgaatgccgttgcgtgcagccagctccttgtagtcccagccataacggaaggcgatggagaacagggtgtcgcctggcttgacgatgtatTg                                                                                                                                       >  7:170768‑M1/148‑149 (MQ=255)
       gggtCACACAGTCATTCGGCAGCGCAAGGACGGGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAgc                                                                                                                                >  7:217145/1‑149 (MQ=255)
                tgaaacgaatcgcttggcccgggcggatggtataaggcgcctgaatgccgttgcgtgcagccagctccttgtagtcccagccataacggaaggcgatggagaacagggtgtcgcctggcttgacgatgtatTGCCCAAGCGCCcggcgg                                                                                                                       <  4:295376‑M1/18‑1 (MQ=255)
                aGTCATTCGGCAGCGCAAGGACGGGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCcggcgg                                                                                                                       >  2:200807/1‑149 (MQ=255)
                    aTTCGGCAGCGCAAGGACGGGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGTGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGAc                                                                                                                   >  3:18772/1‑149 (MQ=255)
                    aTTCGGCAGCGCAAGGACGGGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGa                                                                                                                    <  1:186378/148‑1 (MQ=255)
                    aTTCGGCAGCGCAAGGACGGGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGa                                                                                                                    <  4:281833/148‑1 (MQ=255)
                        ggCAGCGCAAGGAAGTGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCt                                                                                                               >  8:17052/1‑149 (MQ=255)
                                aaGGACGGGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGTGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATa                                                                                                       <  4:18772/149‑1 (MQ=255)
                                   cgggcggatggtataaggcgcctgaatgccgttgcgtgcagccagctccttgtagtcccagccataacggaaggcgatggagaacagggtgtcgcctggcttgacgatgtatTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACAt                                                                                                    >  3:295376‑M1/113‑149 (MQ=255)
                                     cggctctggtTTCAATCTTCTGGTGATTGCATTGGCCAAGGTCTCGCTTAGGGTGGTTTTCTCAATCACCAGCAGGAACAGAGCGCTGGTGGTCGACCGCAACAACACCGTGACCAAGAGCCCGGCGGTGACTTCTGGGCAATACATCg                                                                                                  <  6:159594/149‑1 (MQ=255)
                                         tcgggtTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCaa                                                                                              <  8:217145/149‑1 (MQ=255)
                                         gatggtataaggcgcctgaatgccgttgcgtgcagccagctccttgtagtcccagccataacggaaagcgatggagaacagggtgtcgcctggcttgacgatgtatTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATAc                                                                                                      <  7:126613‑M1/35‑1 (MQ=255)
                                         gatggtataaggcgcctgaatgccgttgcgtgcagccagctccttgtagtcccagccataacggaaagcgatggagaacagggtgtcgcctggcttgacgatgtatTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATAc                                                                                                      >  8:126613‑M1/107‑141 (MQ=255)
                                               ttCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGt                                                                                                                      >  8:177691/1‑119 (MQ=255)
                                               ttCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGt                                                                                                                      <  7:177691/119‑1 (MQ=255)
                                                   aGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGac                                                                                    <  7:207388/149‑1 (MQ=255)
                                                              aTTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTtctc                                                                         >  7:169109/1‑149 (MQ=255)
                                                                           tGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACTTCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGt                                                            >  5:312492/1‑149 (MQ=255)
                                                                                tCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCaa                                                                                                         <  6:365820/99‑1 (MQ=255)
                                                                                    ttCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTgg                                                   >  6:24576/1‑149 (MQ=255)
                                                                                    ttCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTgg                                                   >  7:89122/1‑149 (MQ=255)
                                                                                     tCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATgg                                                       <  4:163932/144‑1 (MQ=255)
                                                                                     tCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATgg                                                       >  3:163932/1‑144 (MQ=255)
                                                                                         gtggGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGa                                                 <  7:17052/146‑1 (MQ=255)
                                                                                             gTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAg                                          <  5:24576/149‑1 (MQ=255)
                                                                                             gTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCCCCTTCCGTTATGGCTGGGACTACAAg                                          <  8:169109/149‑1 (MQ=255)
                                                                                                  tCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTtctc                                                                         >  2:227640/1‑113 (MQ=255)
                                                                                                  tCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTtctc                                                                         <  1:227640/113‑1 (MQ=255)
                                                                                                   cAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAgctg                                    >  4:117592/1‑149 (MQ=255)
                                                                                                       cACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAgctggctg                                <  3:117592/149‑1 (MQ=255)
                                                                                                        aCCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTAATGGCTGGGACTACAAGGAGCTGGCTGc                               <  1:200807/149‑1 (MQ=255)
                                                                                                         ccAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAGCTGGCTGCa                              >  1:238270/1‑149 (MQ=255)
                                                                                                                caACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTg                                                                              <  4:296740/94‑1 (MQ=255)
                                                                                                                caACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTg                                                                              >  3:296740/1‑94 (MQ=255)
                                                                                                                 aaCAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAGCTGGCTGCACGCAACgg                      >  3:294176/1‑149 (MQ=255)
                                                                                                                               ggtCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAGCTGGCTGCACGCAACGGCATTCAGGCGCCt         >  3:46094/1‑148 (MQ=255)
                                                                                                                                gtCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAGCTGGCTGCACGCAACGGCATTCAGGCGCCtt        <  4:46094/148‑1 (MQ=255)
                                                                                                                                  cGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAGCTGGCTGCACGCAACGGCATTCAGGCGCCTtata     <  2:238270/149‑1 (MQ=255)
                                                                                                                                     ccGCAACAACACCGAGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAGCTGGCTGCACGCAACGGCATTCAGGCGCCTTATACCa  >  8:40952/1‑149 (MQ=255)
                                                                                                                                         aacaacACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTg                                                    <  4:100885/95‑1 (MQ=255)
                                                                                                                                         aacaacACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTg                                                    >  3:100885/1‑95 (MQ=255)
                                                                                                                                                   |                                                                                                                                      
CGCGGGTGGGTCACACAGTCATTCGGCAGCGCAAGGACGGGTCGGGTTTCAAGCTTCTGGTGATTGCATTGGCCATGGGCTCGCTTCTGGTGGGTTGCTCAAGCACCAGCAGCAACAGCGCGCGGGTGGTCGACCGCAACAACACCGTGCCCAAGCGCCCGGCGGTGACTTCTGGGCAATACATCGTCAAGCCAGGCGACACCCTGTTCTCCATCGCCTTCCGTTATGGCTGGGACTACAAGGAGCTGGCTGCACGCAACGGCATTCAGGCGCCTTATACCA  >  NC_002947/1817785‑1818066

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.