| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1953718 = | 52 (0.920) | 3 (0.060) | 3/248 | NT | 5.7% | coding (42/1494 nt) | PP_1752 | hypothetical protein |
| ? | NC_002947 | 1953767 = | 50 (0.920) | coding (91/1494 nt) | PP_1752 | hypothetical protein | |||||
TTTTATGCCATCCGGCTGAGCTGTGGGAGCGCGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTGAGACGGTAAAACTGCTC > NC_002947/1953570‑1953859 | ttttATGCCATCCGGCTGAGCTGTGGGAGCGCGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAaggag > 6:295016/1‑149 (MQ=255) ggtctgctggtcgaaggtgagcacatcgatcatgcgcgggtccatccactcgttgagcagttttaccgtctcacccttgccggcgccttcaatgccgttgatcagcacgatcaccggaaaacgcgcctgctgcttgagttcgtactgg > 3:352164‑M1/148‑148 (MQ=255) ttATGCCATCCGGCTGAGCTGTGGGAGCGCGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAaggagg < 1:110774/148‑1 (MQ=255) tCCGGCTGAGCTGTGGGAGCGCGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTacgacg < 1:321165/149‑1 (MQ=255) tgGGAGCGCGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTAcc < 5:298053/146‑1 (MQ=255) tgGGAGCGCGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTAcc > 6:298053/1‑146 (MQ=255) gcgcGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTAc < 2:39420/149‑1 (MQ=255) gcgcGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTAc > 8:114421/1‑149 (MQ=255) gcgTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTAcgc < 6:273507/149‑1 (MQ=255) aTTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGcc > 7:291422/1‑149 (MQ=255) gTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGccc > 4:216186/1‑146 (MQ=255) gTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGccc < 3:216186/146‑1 (MQ=255) tGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCt > 2:148159/1‑149 (MQ=255) ggTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGc < 4:15650/149‑1 (MQ=255) gTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGc > 5:21984/1‑148 (MQ=255) cAATACAGGCCGAAATGAAATCCGCTAGTATTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGccc < 8:325802/148‑1 (MQ=255) cgttgagcagttttaccgtctcacccttgccggcgccttcaatgccgttgatcagcacgatcaccggaaaacgcgcctgctgcttgagttcgtactgGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAg > 7:66858‑M1/98‑149 (MQ=255) cGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTc < 1:148159/149‑1 (MQ=255) aaatgaaatCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTc > 7:296070/1‑147 (MQ=255) atgaaatCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGcc > 2:331908/1‑133 (MQ=255) atgaaatCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGcc < 1:331908/133‑1 (MQ=255) gaaatCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATAGACAAGGAGGCTTACGACGCCGAGGTACCCGATTTACGCGAGGCCCTGCTCGAAGCCCAGAACGAACTAAagcag > 6:99912/1‑149 (MQ=255) ttGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTcc > 1:250960/1‑149 (MQ=255) tCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATc < 4:61716/149‑1 (MQ=255) tCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATc > 5:26173/1‑149 (MQ=255) tCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATc > 5:367656/1‑149 (MQ=255) ttcaatgccgttgatcagcacgatcaccggaaaacgcgcctgctgcttgagttcgtactgGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGt > 4:250806‑M1/61‑113 (MQ=255) ttcaatgccgttgatcagcacgatcaccggaaaacgcgcctgctgcttgagttcgtactgGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGt < 3:250806‑M1/53‑1 (MQ=255) aTTGAAGGAGCCAGTGCATGTTCGAATCTGGCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCa > 1:28366/1‑109 (MQ=255) aTTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCa < 2:28366/109‑1 (MQ=255) ttGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGc < 4:60780/149‑1 (MQ=255) gAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCACTGCTCGAAGACCAGTACGAACTCAAGCAGCAGGCGCTTTTTCCGGTGATCGTGCTGATc > 7:257412/1‑148 (MQ=255) ccAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACg < 7:114421/149‑1 (MQ=255) ccAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACg > 4:55412/1‑149 (MQ=255) tGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCAt < 8:291422/149‑1 (MQ=255) cATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCAGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTg < 5:99912/149‑1 (MQ=255) aTGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTg > 5:49033/1‑148 (MQ=255) tGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGaa < 5:295016/149‑1 (MQ=255) tGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGaa < 6:21984/149‑1 (MQ=255) gTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAg > 1:169479/1‑149 (MQ=255) gTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAg > 3:28981/1‑149 (MQ=255) ttCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAgg < 7:122606/149‑1 (MQ=255) ttCGAATCAGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAgg > 2:216576/1‑149 (MQ=255) gCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGc > 8:179631/1‑147 (MQ=255) ccGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAag < 1:355168/92‑1 (MQ=255) ccGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAag > 2:355168/1‑92 (MQ=255) ccGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCACCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAg > 2:209761/1‑149 (MQ=255) cGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCACCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAgg < 1:209761/149‑1 (MQ=255) gAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAggg > 3:353210/1‑149 (MQ=255) aaaTCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGt > 6:357817/1‑149 (MQ=255) aTCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTga < 4:353210/149‑1 (MQ=255) ggCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTgaga < 5:357817/148‑1 (MQ=255) ccACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTGAGACgg > 4:268271/1‑149 (MQ=255) cacaGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTGAGACGGt < 4:28981/149‑1 (MQ=255) gCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTGAGACGGTaaaa < 8:296070/149‑1 (MQ=255) tCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTGAGACGGTAAAACTg > 1:250799/1‑149 (MQ=255) gACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTGAGACGGTAAAACTGc < 1:216576/148‑1 (MQ=255) aCAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTGAGACGGTAAAACTGCTc < 2:250960/149‑1 (MQ=255) aggaggCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAAc > 7:237486/1‑104 (MQ=255) aggaggCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAAc < 8:237486/104‑1 (MQ=255) | TTTTATGCCATCCGGCTGAGCTGTGGGAGCGCGTTCATTGGTGAAGAGGTCAATACAGGCCGAAATGAAATCCGCTAGTCTTGCTTATCCATTGAAGGAGCCAGTGCATGTTCGAATCTGCCGAAATCGGCCACAGCATCGACAAGGAGGCTTACGACGCCGAGGTACCCGCTTTACGCGAGGCCCTGCTCGAAGCCCAGTACGAACTCAAGCAGCAGGCGCGTTTTCCGGTGATCGTGCTGATCAACGGCATTGAAGGCGCCGGCAAGGGTGAGACGGTAAAACTGCTC > NC_002947/1953570‑1953859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |