New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2148590 = | 46 (0.810) | 5 (0.090) | 5/246 | NT | 10.1% | coding (1930/3276 nt) | rne | ribonuclease E |
? | NC_002947 | 2148659 = | 45 (0.830) | coding (1861/3276 nt) | rne | ribonuclease E |
GGGGTAGCGTCCAGCGGCTCGCGCAGTTCGCGAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGTTCTTCGTTGCGCGGGC > NC_002947/2148442‑2148736 | ttcgccggcaaggacgagcctgccgccgcgccagtggctcccgccgccgaaaaaccggctgccgcgcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcccccgcaacggccgccgcgacgaagaacgcaagcc < 6:88524‑M1/1‑1 (MQ=255) ttcgccggcaaggacgagcctgccgccgcgccagtggctcccgccgccgaaaaaccggctgccgagcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagcc < 3:242919‑M1/1‑1 (MQ=255) gccggcaaggacgagcctgccgccgcgccagtggctcccgccgccgaaaaaccggctgccgagcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagccgc > 5:315718‑M1/146‑148 (MQ=255) tAGCGTCCAGCGGCTCGCGCAGTTCGCGAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCCCGTTCCTCGCGCGGTGCACGCTCTTCGCGt > 6:359249/1‑149 (MQ=255) ccggcaaggacgagcctgccgccgcgccagtggctcccgccgccgaaaaaccggctgccgagcgcagcccgcgcaacgaagaacgccgcaacggccgccagcacagccgcaaccgcaacggccgccgcgacgaagaacgcaagcCGCGt < 4:12892‑M1/5‑1 (MQ=255) ccggcaaggacgagcctgccgccgcgccagtggctcccgccgccgaaaaaccggctgccgagcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagcCGCGt < 4:208162‑M1/5‑1 (MQ=255) caaggacgagcctgccgccgcgccagtggctcccgccgccgaaaaaccggctgccgagcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagccgc > 6:211262‑M1/141‑143 (MQ=255) caaggacgagcctgccgccgcgccagtggctcccgccgccgaaaaaccggctgccgagcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagccgc < 5:211262‑M1/3‑1 (MQ=255) tCCAGCGGCTCGCGCAGTTAGCGAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTAGCGCGGTGCACGCTCTTCGCGTGGGgc > 8:56680/1‑149 (MQ=255) cgcgCAGTTCGCGAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTACGCGTGGCTGGCGCGGCGCACGTGCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTcg < 1:347035/149‑1 (MQ=255) gcgcAGTTCGCGAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTc < 8:191073/147‑1 (MQ=255) cAGTTCGCGAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTcgcgcg < 8:167891/149‑1 (MQ=255) cAGTTCGCGAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCCcgcgcg < 8:157755/149‑1 (MQ=255) cgcgAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGc < 1:225428/148‑1 (MQ=255) gtggctcccgccgccgaaaaaccggctgccgagcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccggcgcgacgaagaacgcaagcCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGctc < 5:271548‑M1/34‑1 (MQ=255) gcgcTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCtt < 7:235193/149‑1 (MQ=255) tctTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCAcg > 1:129694/1‑149 (MQ=255) ttCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCAcgcg > 6:320048/1‑149 (MQ=255) cgccgcGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGt > 1:285016/1‑149 (MQ=255) gccgcGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGgc < 1:207116/114‑1 (MQ=255) gccgcGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGgc > 2:207116/1‑114 (MQ=255) ccgcGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTgc < 7:56680/149‑1 (MQ=255) cgGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTgcgcg > 7:206320/1‑149 (MQ=255) ggTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTgcgcgc > 6:289828/1‑149 (MQ=255) ttGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCTGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTc < 2:246137/149‑1 (MQ=255) gCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCg < 8:206320/148‑1 (MQ=255) gCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCg < 2:129694/148‑1 (MQ=255) accggctgccgagcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagcCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCgg < 1:227614‑M1/54‑1 (MQ=255) ccACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCgg < 5:320048/148‑1 (MQ=255) tCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTc < 5:359249/149‑1 (MQ=255) tCTTCGCGTGGCTGGCGCGGCGCACGGTCTTCACGCCGTGCACGCTCTTCACGTGGGTCACGGTCCTCCCGCGGTGCACGCTCTTCGCGTGGGGCGCGGTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTc < 2:103804/149‑1 (MQ=38) cTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCa > 4:347459/1‑149 (MQ=255) gcgcagcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagcCGCGTGAAGAGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCAc > 2:201780‑M1/84‑149 (MQ=255) cgcgTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCAc < 2:285016/147‑1 (MQ=255) gcgTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTcgc < 7:68560/101‑1 (MQ=255) gcgTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTcgc > 8:68560/1‑101 (MQ=255) gcccgcgcaacgaagaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagcCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACACGGc > 6:271548‑M1/79‑149 (MQ=255) gctggcGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTg < 5:289828/149‑1 (MQ=255) tggcGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCg > 6:179455/1‑149 (MQ=255) gcgcggcgcACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGc < 1:295385/146‑1 (MQ=255) gcgcggcgcACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGc > 2:295385/1‑146 (MQ=255) agaacgccgcaacggccgccagcaaagccgcaaccgcaacggccgccgcgacgaagaacgcaagcCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTtcgt > 2:227614‑M1/66‑149 (MQ=255) ttcACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCggcggc > 3:350166/1‑149 (MQ=255) tcACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGcc > 7:114379/1‑149 (MQ=255) gcgGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCgttg > 2:266930/1‑149 (MQ=255) ggTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCgttgcg > 7:245360/1‑149 (MQ=255) ctctTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGc < 1:266930/149‑1 (MQ=255) cACGTGTGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCGCTTCTCGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCttt < 3:204606/147‑1 (MQ=255) cACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCttt < 8:245360/147‑1 (MQ=255) cACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCttt < 3:347459/147‑1 (MQ=255) cACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGc > 3:149132/1‑149 (MQ=255) ggggCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCt < 3:249703/82‑1 (MQ=255) ggggCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCt > 4:249703/1‑82 (MQ=255) tCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGGTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTgcg > 5:88524/1‑149 (MQ=255) cACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGttctt > 7:317391/1‑144 (MQ=255) cACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGttctt < 8:317391/144‑1 (MQ=255) cACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGTTCTTCGtt < 4:350166/148‑1 (MQ=255) cGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGTTCTTCGTTgcg < 5:179455/149‑1 (MQ=255) gCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTGCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGTTCTTCGTTgctc > 7:125502/1‑147 (MQ=255) ttCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGTTCTTCGTTGCGCGGGc > 2:332227/1‑149 (MQ=255) ttCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGTTCTTCGTTGCGCGGGc > 3:276115/1‑149 (MQ=255) | GGGGTAGCGTCCAGCGGCTCGCGCAGTTCGCGAACGCGCTCTTCGCCGCGGTTGCCACGGCGGTCTTCGCGTGGCTGGCGCGGCGCACGTTCTTCACGCGGTGCACGCTCTTCACGTGGGGCACGTTCCTCGCGCGGTGCACGCTCTTCGCGTGGGGCGCGTTCCTCGCGCGGTGCACGCTCTTCACGCGGTGCGCGCTCGGCACGCTCTTCACGCGGCTTGCGTTCTTCGTCGCGGCGGCCGTTGCGGTTGCGGCTTTGCTGGCGGCCGTTGCGGCGTTCTTCGTTGCGCGGGC > NC_002947/2148442‑2148736 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |