| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4647595 | 11 (0.190) | 7 (0.180) | 6/180 | NT | 44.2% | intergenic (+48/+83) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | = 4647625 | 10 (0.250) | intergenic (+78/+53) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
TGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGC > NC_002947/4647447‑4647739 | tGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGG < 1:211159‑M1/149‑1 (MQ=255) aGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcg > 1:23578‑M1/1‑143 (MQ=255) ccgggccAGCTTCTCGATGGAGCTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAg < 1:226382/149‑1 (MQ=255) cTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAAc < 5:109040/148‑1 (MQ=255) cTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAAc > 6:109040/1‑148 (MQ=255) cTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACa < 4:157304/149‑1 (MQ=255) tcGATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATtgt > 7:44186/1‑149 (MQ=255) gATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTgc > 3:181045/1‑149 (MQ=255) tGGAGTTCACCCGCTATGCCGAGGCCCCGGCGGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTgcg > 1:37876/1‑149 (MQ=255) aCCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCTCTGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctg > 4:181045‑M2/1‑144 (MQ=255) aCCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctg > 5:140475‑M1/1‑114 (MQ=255) cccGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgta > 8:44186‑M2/1‑143 (MQ=255) ccGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtag > 7:241400‑M2/1‑142 (MQ=255) gCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtagga < 2:23578‑M1/149‑40 (MQ=255) cTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggag < 6:140475‑M1/149‑41 (MQ=255) tGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGATTAAGCGGTTCTCCTGTGCGGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg > 7:304836‑M2/1‑136 (MQ=255) tGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgg < 5:144081‑M1/149‑44 (MQ=255) tGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgg < 8:118633‑M1/149‑44 (MQ=255) tGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg > 2:37876‑M2/1‑136 (MQ=255) tGCCGAGGCCCC‑‑C‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggt > 6:310410‑M2/1‑134 (MQ=255) ccGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggt > 5:312974‑M2/1‑134 (MQ=255) cccGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGCTGGGCGCAGGGCCAAACATTGTGCGCCCCcctgttggagcggggtttcccg < 7:97708‑M2/149‑23 (MQ=255) ggC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcga > 5:81323‑M2/1‑124 (MQ=255) c‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaag > 2:199839‑M2/1‑122 (MQ=255) c‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCccggtaggagcgggtttacccgcg < 1:199839‑M2/146‑25 (MQ=255) tggccGATGGCATCGTCAAGAAGCGCCGCGGGGAGTAAGCGGTTCTCCGGTGCCGGCCTCTTCGCGGGTAACCCCGCTCCTACAGGAGGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccg > 8:97708‑M2/3‑116 (MQ=255) gCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggttt > 8:35579‑M2/1‑107 (MQ=255) gCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggttt < 7:35579‑M2/124‑18 (MQ=255) gTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggt < 4:16048‑M2/117‑16 (MQ=255) gTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggt > 3:16048‑M2/1‑102 (MQ=255) ccGCGGGGAGTAAGCGGTTCTCTTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagc < 4:114972‑M1/102‑42 (MQ=255) cgcctgctTCGCGGGAAACCCCCCTCCTACCGCTGGCCCGACGCCCCAACCTTTGCCCCCCCCCCTGACGTAGGGGTTTAACCCGCTAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGcttc < 5:250277/143‑1 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccctcctgtaggagcggggttacccgcgaagaggccggcaccggagaaccgcttactccccgcggcgcttcttgacgatgccatcggcca > 8:97708‑M1/1‑33 (MQ=255) ctTCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcg > 2:199839‑M1/1‑27 (MQ=255) tCGCGGGTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgcc > 5:81323‑M1/1‑25 (MQ=255) cgcgGGTAAACCCGCTCCTACCGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcg < 1:199839‑M1/146‑123 (MQ=255) cgcgGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtag < 4:188328‑M2/61‑8 (MQ=255) cgcgGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtag > 3:188328‑M2/1‑54 (MQ=255) gcgGGTAAACCCGCACCTACAGCATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACAGCAACAGTATTCAATGCTGCTCGCCCGCCCGCATCAACAGCTTCTAGCACCGCt > 4:277529/1‑149 (MQ=38) cgGGAAACCCCGCTCCAACAGGggggcgcacaatgtttggccctgcgcccagcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggg < 7:97708‑M1/149‑128 (MQ=255) gggTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttac < 6:275304‑M2/70‑20 (MQ=255) gggTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttac > 5:275304‑M2/1‑51 (MQ=255) gTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttaccc < 6:275304‑M1/70‑52 (MQ=255) gTAAACCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttaccc > 5:275304‑M1/1‑19 (MQ=255) aaaCCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgc > 8:35579‑M1/1‑17 (MQ=255) aaaCCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgc < 7:35579‑M1/124‑108 (MQ=255) aCCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgggggcctcggca > 6:310410‑M1/1‑15 (MQ=255) aCCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcgg > 5:312974‑M1/1‑15 (MQ=255) aCCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgac < 4:16048‑M1/117‑103 (MQ=255) aCCCGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgac > 3:16048‑M1/1‑15 (MQ=255) aCCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACaaa > 7:268664/1‑149 (MQ=255) ccGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggca > 2:37876‑M1/1‑13 (MQ=255) ccGCTCCTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggcccgcacaggagaaccgcttaatccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggca > 7:304836‑M1/1‑13 (MQ=255) ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggca < 8:118633‑M2/149‑107 (MQ=255) ccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggca < 5:144081‑M2/149‑107 (MQ=255) gCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaagagaaccgcttactccccgcgg < 4:114972‑M2/102‑62 (MQ=255) cTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatag < 6:140475‑M2/149‑110 (MQ=255) tCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagc < 2:23578‑M2/149‑111 (MQ=255) cTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcgg > 7:241400‑M1/1‑7 (MQ=255) cTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcg > 3:188328‑M1/1‑7 (MQ=255) cTACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcg < 4:188328‑M1/61‑55 (MQ=255) tACAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcggg > 8:44186‑M1/1‑6 (MQ=255) tACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCAcg > 4:119571/1‑149 (MQ=255) cAGGggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttaccagagaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcgggt > 4:181045‑M1/1‑4 (MQ=255) cAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatagcgggt > 5:140475‑M2/1‑34 (MQ=255) | TGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGC‑GAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGC > NC_002947/4647447‑4647739 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |