New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5724935 =	46 (0.810)	4 (0.070)	3/244	NT	8.3%	coding (2031/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H
	?	NC_002947	5725015 =	45 (0.840)					coding (1951/2574 nt)	opgH	glucans biosynthesis glucosyltransferase H

GCGTGGCGTATTCCTCTGGGATAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGG  >  NC_002947/5724787‑5725083                                                                                                                                                     |                                                                                                                                                     gcgtggcgtATTCCTCTGGGATAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAAc                                                                                                                                                      >  2:217437/1‑149 (MQ=255)    tggcgtATTCCTCTGGGATAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCAc                                                                                                                                                   <  6:180655/149‑1 (MQ=255)     tcaaggtcaccttggcgatgctgatggagatgctgttctccatgttgctggcaccggtacgcatgatcttccacacccgcttcgtgctggccgcattcctcggctgggctgcgacctggaactcgccgcagcgtgacgacgactCCACg                                                                                                                                                  >  7:56171‑M1/145‑149 (MQ=255)       aaggtcaccttgtcgatgctgatggagatgctgttctccatgttgctggcaccggtacgcatgatcttccacacccgcttcgtgctggccgcattcctcggctgggctgcgacctggaactcgccgcagcgtgacgacgactCCACGcc                                                                                                                                                >  1:74176‑M1/143‑149 (MQ=255)        gtATTCCTCTGGGATAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCA‑CACAGGAAGCTCGGGTTCAACCACGccac                                                                                                                                              <  1:17782/149‑1 (MQ=255)               tctGGGATAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGc                                                                                                                                        >  6:134137/1‑149 (MQ=255)               tctGGGATAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGc                                                                                                                                        >  4:254615/1‑149 (MQ=255)               tctGGGATAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGc                                                                                                                                        >  3:253563/1‑149 (MQ=255)                      tAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAg                                                                                                                                 >  2:63979/1‑149 (MQ=255)                        aGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAgg                                                                                                                                <  4:174290/148‑1 (MQ=255)                          gAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCaa                                                                                                                             <  2:264848/149‑1 (MQ=255)                                cTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGcc                                                                                                                         >  5:32602/1‑147 (MQ=255)                                   ctcGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCcag                                                                                                                      <  3:254615/147‑1 (MQ=255)                                      tgttctccatgttgctggcaccggtacgcatgatcttccacacccgcttcgtgctggccgcattcctcggctgggctgcgacctggaactcgccgcagcgtgacgacgactCCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCg                                                                                                                 <  2:157397‑M1/38‑1 (MQ=255)                                         cTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCt                                                                                                              <  3:160477/149‑1 (MQ=255)                                         cTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCt                                                                                                              >  4:160477/1‑149 (MQ=255)                                           tGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGc                                                                                                            >  5:322662/1‑149 (MQ=255)                                            ggCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCg                                                                                                           >  8:119539/1‑149 (MQ=255)                                             gccgccAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCgg                                                                                                          <  2:268062/149‑1 (MQ=255)                                                      cccaggcGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCg                                                                                                 <  2:299706/149‑1 (MQ=255)                                                      cccaggcGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCg                                                                                                 >  1:299706/1‑149 (MQ=255)                                                         accggtacgcatgatcttccacacccgcttcgtgctggccgcattcctcggctgggctgcgacctggaactcgccgcagcgtgacgacgactCCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGgcg                                                                                              <  5:88259‑M1/57‑1 (MQ=255)                                                                  cGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCtt                                                                                      <  5:134137/148‑1 (MQ=255)                                                                    gCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGc                                                                                   >  3:123355/1‑149 (MQ=255)                                                                    gCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGc                                                                                   <  2:130209/149‑1 (MQ=255)                                                                               ccGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTg                                                                        <  6:32602/149‑1 (MQ=255)                                                                               ccGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTg                                                                        <  4:123355/149‑1 (MQ=255)                                                                               acccgcttcgtgctggccgcattcctcggctgggctgcgacctggaactcgccgcagcgtgacgacgactCCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTg                                                                        >  1:157397‑M1/71‑149 (MQ=255)                                                                               acccgcttcgtgctggccgcattcctcggctgggctgcgacctggaactcgccgcagcgtgacgacgactCCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTg                                                                        >  6:88259‑M1/71‑149 (MQ=255)                                                                                      cGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAgtcgt                                                                 >  4:65918/1‑149 (MQ=255)                                                                                              aCAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATg                                                                                                    >  4:148660/1‑106 (MQ=255)                                                                                              aCAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATg                                                                                                    <  3:148660/106‑1 (MQ=255)                                                                                                 gCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGc                                                                                                        <  3:305225/99‑1 (MQ=255)                                                                                                 gCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGc                                                                                                        >  4:305225/1‑99 (MQ=255)                                                                                                     cAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGc                                                                                                   >  4:152824/1‑100 (MQ=255)                                                                                                     cAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGc                                                                                                   <  3:152824/100‑1 (MQ=255)                                                                                                      aGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGa                                                 <  1:217437/149‑1 (MQ=255)                                                                                                        cGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCa                                                                                                                                  >  7:156577/1‑66 (MQ=255)                                                                                                        cGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCa                                                                                                                                  <  8:156577/66‑1 (MQ=255)                                                                                                           aCCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTcc                                            <  4:288909/149‑1 (MQ=255)                                                                                                             cgacgaTAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCTCGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAg                                          <  1:63979/149‑1 (MQ=255)                                                                                                             cgacgaTAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAg                                          >  7:130137/1‑149 (MQ=255)                                                                                                                cgaTAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTc                                       >  5:111572/1‑149 (MQ=255)                                                                                                                  aTAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGc                                     <  7:119539/149‑1 (MQ=255)                                                                                                                    aGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGcag                                   >  1:231181/1‑149 (MQ=255)                                                                                                                      gcgcCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTcc                                            >  4:247260/1‑138 (MQ=255)                                                                                                                      gcgcCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTcc                                            <  3:247260/138‑1 (MQ=255)                                                                                                                      gcgcCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGcagcc                                 >  5:313996/1‑149 (MQ=255)                                                                                                                             ccaccaCAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGa                          <  6:111572/149‑1 (MQ=255)                                                                                                                                        aGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGcc               <  6:366873/149‑1 (MQ=255)                                                                                                                                           tCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAg             >  4:84725/1‑148 (MQ=255)                                                                                                                                            cGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCa           >  7:282463/1‑149 (MQ=255)                                                                                                                                             gggTTGAACCACGCCACCAGAGCTGCCCACGCAATGCCCTGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTGGCCCCTCGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGc            <  4:253563/147‑1 (MQ=255)                                                                                                                                             gggTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCAc          >  1:189461/1‑149 (MQ=255)                                                                                                                                                ttCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGcc               <  6:338308/141‑1 (MQ=255)                                                                                                                                                ttCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGcc               >  5:338308/1‑141 (MQ=255)                                                                                                                                                  cAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAg      <  6:322662/148‑1 (MQ=255)                                                                                                                                                   aaCCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCg    >  7:124384/1‑149 (MQ=255)                                                                                                                                                    aCCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCgg   >  1:113208/1‑149 (MQ=255)                                                                                                                                                     CCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCggg  <  2:88217‑M1/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCGTGGCGTATTCCTCTGGGATAAGGAACAGCTTCTCGTCCTTGGCCGCCAGGCCCAGGCGGGTGCGGCTGGAAATCACCGATACCGGGATCGACAGCACCAGCGAACCGACGATAGGCGCCAGCCACCACAGGAAGCTCGGGTTCAACCACGCCACCAGTGCGGCCCAGGCAATGCCCAGCAGCGTCTGCGGGCCATGCCGGCGCACCGCTTCGCCCCACGGCGTGGAGTCGTCGTCACGCTGCGGCGAGTTCCAGGTCGCAGCCCAGCCGAGGAATGCGGCCAGCACGAAGCGGG  >  NC_002947/5724787‑5725083

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.