New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5989987 =3298 (58.330)60 (1.120) 29/244 NT 1.9% intergenic (+299/+50) PP_5247/ycaC‑III hypothetical protein/putative hydrolase
?NC_002947 5990011 = 3092 (57.820)intergenic (+323/+26) PP_5247/ycaC‑III hypothetical protein/putative hydrolase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 3994 total aligned reads displayed.

AGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGCAGCCAGCCCTTCGACATCGTTGCG  >  NC_002947/5989839‑5990135
                                                                                                                                                    |                                                                                                                                                    
 ctgcgagctgcaccgcgactggcgcaacgatgtcgaagggctggctgcactttgctccaaccacattccggattatcgcaacctgatgaccagctataacgcgctgactgcgggtaagtaatcaaccaccagcaacgtgcacaaaggcc                                                                                                                                                     <  5:228082‑M1/2‑1 (MQ=255)
     tcACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCT                                                                                                                                                 <  5:255667‑M1/149‑1 (MQ=255)
        cccTACACTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTccc                                                                                                                                              <  1:235706/149‑1 (MQ=255)
             cacTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACag                                                                                                                                         <  7:80495/149‑1 (MQ=255)
              acTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACaga                                                                                                                                        <  2:297738/149‑1 (MQ=255)
              acTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACa                                                                                                                                          >  1:301686/1‑147 (MQ=255)
                tgatgaTTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACaga                                                                                                                                        >  4:96738/1‑147 (MQ=255)
                tgatgaTTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACaga                                                                                                                                        >  3:123586/1‑147 (MQ=255)
                tgatgaTTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACaga                                                                                                                                        >  2:134479/1‑147 (MQ=255)
                 gatgatTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACaga                                                                                                                                        >  5:289355/1‑146 (MQ=255)
                  atgatTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGGCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAga                                                                                                                                    >  6:315329‑M2/1‑147 (MQ=255)
                  atgatTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACagaga                                                                                                                                      >  2:163749/1‑147 (MQ=255)
                       tCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCtctctgtagggagccg                                                                                                                                <  8:209291‑M1/148‑17 (MQ=255)
                       tCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAgagccgg                                                                                                                               <  8:176759‑M2/149‑8 (MQ=255)
                         aGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCtctctgtagggagccggtt                                                                                                                             <  7:145525‑M1/149‑20 (MQ=255)
                           ccATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTAc                                                                                                                                           <  8:158618/133‑1 (MQ=255)
                            cATCGCTGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCttt                                                                                                                          <  4:68991/149‑1 (MQ=255)
                            cATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCttt                                                                                                                          <  5:319413/149‑1 (MQ=255)
                            cATCGATGGGGGTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCttt                                                                                                                          <  6:79000/149‑1 (MQ=255)
                                gATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGc                                                                                                                      >  8:239783/1‑149 (MQ=255)
                                gATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGc                                                                                                                      <  1:348188/149‑1 (MQ=255)
                                 aTGCGGATCCTGAACCAGTGACTGCCTCTGAATGACAACTGGCTTCGCGCTCTGTTGAAACGCAAACAATCCCGCCAATACAGGTCAACGACTGCAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCa                                                                                                                     <  4:281465/149‑1 (MQ=255)
                                    gggTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGt                                                                                                                  >  4:146591/1‑149 (MQ=255)
                                      gTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTg                                                                                                                >  3:152280/1‑149 (MQ=255)
                                       ttCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGc                                                                                                               <  1:184122/149‑1 (MQ=255)
                                          cTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGc                                                                                                                      <  7:19989/139‑1 (MQ=255)
                                          cTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtgg                                                                                                            <  2:269482/149‑1 (MQ=255)
                                          cTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtg                                                                                                             <  6:34459/148‑1 (MQ=255)
                                          cTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtg                                                                                                             <  8:132563/148‑1 (MQ=255)
                                          cTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACGGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtg                                                                                                             <  7:166267/148‑1 (MQ=255)
                                           tGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtggt                                                                                                           >  7:223395/1‑149 (MQ=255)
                                            gATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtggtg                                                                                                          >  3:174470/1‑149 (MQ=255)
                                             aTCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtggtgg                                                                                                         >  4:194532/1‑149 (MQ=255)
                                             aTCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtggt                                                                                                           <  4:304288/147‑1 (MQ=255)
                                               ccAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGtt                                                                                                       >  5:5975/1‑149 (MQ=255)
                                                cAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCACCGACTGGAACAAAGCGCAACAAAAAAACCGGCTCTCTCTGTAGGgagccggttttttt                                                                                                                        <  3:201151‑M2/131‑15 (MQ=255)
                                                cAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGtt                                                                                                       >  6:284700/1‑148 (MQ=255)
                                                cAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGtt                                                                                                       <  2:187782/148‑1 (MQ=255)
                                                cAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTg                                                                                                      <  6:259822/149‑1 (MQ=255)
                                                 aGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGa                                                                                                     <  7:105493/149‑1 (MQ=255)
                                                   ttACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGAt                                                                                                    >  7:337572/1‑148 (MQ=255)
                                                      cTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGtt                                                                                                       >  4:218849/1‑142 (MQ=255)
                                                         ccGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTAc                                                                                                                                           >  6:132362/1‑103 (MQ=255)
                                                           gcagAATGTCAACTGGCTTCGCCGTCGGGTGAAACGCTAACAAAGCCGCCAATACACGTCAACGTCTCGAACCAAGCGCAACAAAAAAACCGGCTCCCTACAGTTAGTGCCGGCCTTTGTGCACGGTTCTTGTGGTTGATTACTTAccc                                                                                           <  2:339530/146‑1 (MQ=255)
                                                           gCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTcc                                                                                                                                               >  1:100292/1‑97 (MQ=255)
                                                           gCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCtggtg                                                                                                          >  2:94933/1‑134 (MQ=255)
                                                           gCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTAccc                                                                                           <  2:318441/149‑1 (MQ=255)
                                                           gCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTAccc                                                                                           >  4:240761/1‑149 (MQ=255)
                                                           gCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTAccc                                                                                           >  8:38649/1‑149 (MQ=255)
                                                               aaTGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCa                                                                                        <  6:368080/148‑1 (MQ=255)
                                                                 tGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGt                                                                                      >  3:26190/1‑148 (MQ=255)
                                                                 tGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGt                                                                                      >  3:346480/1‑148 (MQ=255)
                                                                   aCAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCa                                                                                    <  2:73606/148‑1 (MQ=255)
                                                                    cAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAgc                                                                                  <  5:201431/149‑1 (MQ=255)
                                                                    cAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAgc                                                                                  <  3:243377/149‑1 (MQ=255)
                                                                          gCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGc                                                                                                                              <  3:223668/99‑1 (MQ=255)
                                                                          gCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCttt                                                                                                                          >  6:158468/1‑103 (MQ=255)
                                                                            ttCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTAccc                                                                                           <  3:285854/132‑1 (MQ=255)
                                                                            ttCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCa                                                                                        >  4:109866/1‑135 (MQ=255)
                                                                                cgcTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTg                                                                      <  6:231475/149‑1 (MQ=255)
                                                                                   tCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGt                                                                    >  1:207848/1‑148 (MQ=255)
                                                                                      ggTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGtcat                                                                 >  2:211718/1‑148 (MQ=255)
                                                                                             cGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGc                                                         <  6:107642/149‑1 (MQ=255)
                                                                                              gCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGtcatca                                                               >  3:5654/1‑142 (MQ=255)
                                                                                              gCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGc                                                         >  5:1725/1‑148 (MQ=255)
                                                                                              gCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGc                                                         >  7:293160/1‑148 (MQ=255)
                                                                                               cTAACAATGGCGCCAATACAGGTCAACGACTGGAACTAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCATCGCGTTATAGCTGGTCATCAGGTTGCGa                                                       <  3:77799/149‑1 (MQ=255)
                                                                                                  aCAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGAt                                                      <  8:67156/147‑1 (MQ=255)
                                                                                                    aaTGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATc                                                  >  1:80916/1‑149 (MQ=255)
                                                                                                          gccAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAAt                                            >  6:20796/1‑149 (MQ=255)
                                                                                                          gccAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAAt                                            >  1:323411/1‑149 (MQ=255)
                                                                                                           ccAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTTCTTACCCGCAGTCAGTGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAAtg                                           >  4:340133/1‑149 (MQ=255)
                                                                                                             aaTACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCCGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAAtgtg                                         <  5:149292/149‑1 (MQ=255)
                                                                                                                aCAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAAtgt                                          <  1:271032/145‑1 (MQ=255)
                                                                                                                aCAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGtt                                      <  7:128360/149‑1 (MQ=255)
                                                                                                                 cAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGtt                                      <  7:58494/148‑1 (MQ=255)
                                                                                                                 cAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTg                                     <  3:316009/149‑1 (MQ=255)
                                                                                                                   ggTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGa                                   <  1:131580/149‑1 (MQ=255)
                                                                                                                     tCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTg                                                          >  6:55271/1‑124 (MQ=255)
                                                                                                                       aaCGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGt                                                                                      >  8:263594/1‑94 (MQ=255)
                                                                                                                        tcgaattgAACAAATCTCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCTCGTTGCTGGTGTTTTATTACTTAACCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCaaa                              <  5:118480/142‑1 (MQ=255)
                                                                                                                        aCGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCaaa                              <  8:30329/149‑1 (MQ=255)
                                                                                                                          gACTGGACCAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTg                                     <  8:327281/140‑1 (MQ=255)
                                                                                                                           aCTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTg                                                                      >  1:52633/1‑106 (MQ=255)
                                                                                                                           aCTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTgg                                    >  4:40970/1‑140 (MQ=255)
                                                                                                                             tGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTgg                                        <  7:272903/134‑1 (MQ=255)
                                                                                                                               gAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGa                                                       <  5:368793/117‑1 (MQ=255)
                                                                                                                                  cAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGcagccag                    >  6:185486/1‑149 (MQ=255)
                                                                                                                                  cAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGcagccag                    >  4:169726/1‑149 (MQ=255)
                                                                                                                                     aGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGa                                                       <  8:282424/111‑1 (MQ=255)
                                                                                                                                     aGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGTAGCAAAGTGCAGCCAGccc                 <  4:261137/149‑1 (MQ=255)
                                                                                                                                          aacaaAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGCAGCCAGCCCTTCGa            >  7:254074/1‑149 (MQ=255)
                                                                                                                                           acaaAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGcagccagc                   <  7:312421/141‑1 (MQ=255)
                                                                                                                                            caaAAAAACCGGCTCcctacagagagagccggtttttttgttgcgctttgttccagtcgttgacctgtattggcggcattgttagcgtttcacccgagcgcgaagccagttgtcattcagcggcagtaactggatc                       <  2:44049‑M1/136‑122 (MQ=255)
                                                                                                                                            caaAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTg                                                                      <  1:159626/89‑1 (MQ=255)
                                                                                                                                            caaAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGCAGCCAGCCCTTCGACa          <  5:345530/149‑1 (MQ=255)
                                                                                                                                               aaaaaCCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGCAGCCAGCCCTTCGACATCg       <  2:111334/149‑1 (MQ=255)
                                                                                                                                                  aaCCGGCTCCCTACAGAGAgagccggtttttttgttgcgctttgttccagtcgttgacctgtattggcggcatt                                                                               >  5:80530‑M2/1‑19 (MQ=255)
                                                                                                                                                  aaCCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGt                            <  8:106895/125‑1 (MQ=255)
                                                                                                                                                    CCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGCAGCCAGCCCTTCGACa          <  2:24039‑M1/141‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
AGGTCTCACCCTACACTGATGATTCAGCCATCGATGGGGTTCCTGATCCAGTTACTGCCGCTGAATGACAACTGGCTTCGCGCTCGGGTGAAACGCTAACAATGCCGCCAATACAGGTCAACGACTGGAACAAAGCGCAACAAAAAAACCGGCTCCCTACAGAGAGAGCCGGCCTTTGTGCACGTTGCTGGTGGTTGATTACTTACCCGCAGTCAGCGCGTTATAGCTGGTCATCAGGTTGCGATAATCCGGAATGTGGTTGGAGCAAAGTGCAGCCAGCCCTTCGACATCGTTGCG  >  NC_002947/5989839‑5990135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.