New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 723492	66 (1.170)	4 (0.070)	4/248	NT	5.7%	coding (277/1020 nt)	PP_0617	branched‑chain amino acid ABC transporter permease
	?	NC_002947	= 723549	68 (1.250)					coding (220/1020 nt)	PP_0617	branched‑chain amino acid ABC transporter permease

AGGGTCAGCATGACGAAGTAGATGCCCGTGCGACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAGCGCCACCAGG  >  NC_002947/723404‑723697                                                                                                                                                  |                                                                                                                                                          aGGGTCAGCATGACGAAGTAGATGCCCGTGCGACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAggc                                                                                                                                                        >  7:193599‑M2/1‑146 (MQ=255)    gTCAGCATGACGAAGTAGATGCCCGTGCGACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGcc                                                                                                                                                     >  7:3493/1‑149 (MQ=255)             aCGAAGTAGATGCCCGTGCGACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑Caaa                                                                                                                                           <  2:119162/149‑1 (MQ=255)                 aGTAGATGCCCGTGCGACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAaagaag                                                                                                                                       <  8:92139/149‑1 (MQ=255)                 aGTAGATGCCCGTGCGACGGATCGCCAGTGCGCACACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGTCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAaagaag                                                                                                                                       <  5:198832/149‑1 (MQ=255)                   tAGATGCCCGTGCGACGGATCGCCAGCGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGAt                                                                                                                                     <  4:211601/149‑1 (MQ=255)                        gCCCGTGCGACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCt                                                                                                                                >  7:234310/1‑149 (MQ=255)                          ccGTGCGACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTgg                                                                                                                              >  6:231555/1‑149 (MQ=255)                                gACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAAc                                                                                                                       <  5:66869/149‑1 (MQ=255)                                 aCGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAAc                                                                                                                       >  5:155663/1‑148 (MQ=255)                                  cGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGa                                                                                                                     <  8:234310/149‑1 (MQ=255)                                   ggATCGCCAGTGCGCCCACCAGCGGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑ccacc                                                                                                                        >  4:266399/1‑142 (MQ=255)                                   ggATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGa                                                                                                                     >  1:349114/1‑148 (MQ=255)                                    gATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑ca                                                                                                                <  7:110697/149‑1 (MQ=255)                                    gATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑ca                                                                                                                <  7:135595/149‑1 (MQ=255)                                      tCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑cag                                                                                                               >  7:288028/1‑148 (MQ=255)                                      tCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCACGGG‑CCGACCGA‑‑‑cagc                                                                                                              >  4:211486/1‑149 (MQ=255)                                          cAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTc                                                                                                          >  2:674/1‑149 (MQ=255)                                          cAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTc                                                                                                          <  5:235112/149‑1 (MQ=255)                                            gTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCg                                                                                                        <  8:3493/149‑1 (MQ=255)                                            gTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCg                                                                                                        <  1:674/149‑1 (MQ=255)                                                 cccACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGgt                                                                                                      <  7:218024/146‑1 (MQ=255)                                                 cccACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGgt                                                                                                      >  8:218024/1‑146 (MQ=255)                                                  ccaccaGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAg                                                                                                  >  2:278356/1‑149 (MQ=255)                                                   caccaGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGc                                                                                                 >  1:196874/1‑149 (MQ=255)                                                     ccaGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGTCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGGTCCGAACGA‑‑‑CAGCAGTCCGGTGTAGcc                                                                                                <  1:4040/149‑1 (MQ=255)                                                       agcagcGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGag                                                                                             >  8:266280/1‑149 (MQ=255)                                                                  gAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGC‑‑‑CAGCAGTCCGGTGTAGCCGCGCAGCAGGTTg                                                                                   >  8:274105/1‑148 (MQ=255)                                                                  gAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTg                                                                                   >  6:299228/1‑148 (MQ=255)                                                                  gAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTg                                                                                   >  2:20199/1‑148 (MQ=255)                                                                  gAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTg                                                                                   >  1:16600/1‑148 (MQ=255)                                                                     ggCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAgg                                                                               >  5:275964/1‑149 (MQ=255)                                                                      gcgcCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGc                                                                              >  4:320898/1‑149 (MQ=255)                                                                        gcCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCa                                                                            <  6:275964/149‑1 (MQ=255)                                                                          cGAACACTGCTTCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGgt                                                                                                      <  4:343274/121‑1 (MQ=255)                                                                          cGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGgt                                                                                                      >  3:343274/1‑121 (MQ=255)                                                                          cGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGt                                                                          <  3:320898/149‑1 (MQ=255)                                                                                ctgctgCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGcc                                                                    <  4:144361/149‑1 (MQ=255)                                                                                 tgctgcGCCAAGCAGCGCGGCGAATATGCCCCACTGCGGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCa                                                                   >  5:253846/1‑149 (MQ=255)                                                                                   ctgcGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAggcgcagcagtgttcggcgccttcctcgcgctgctggtgggcgcactggcgatccgtcgcacgggcatctacttcgtcatgctga                                                                      <  1:330110‑M2/149‑86 (MQ=255)                                                                                   ctgcGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑c                                                                                                                            <  7:94591/93‑1 (MQ=255)                                                                                   ctgcGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑c                                                                                                                            >  8:94591/1‑93 (MQ=255)                                                                                   ctgcGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATg                                                                 <  2:16600/149‑1 (MQ=255)                                                                                   ctgcGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATg                                                                 >  8:12231/1‑149 (MQ=255)                                                                                    tgcGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATgg                                                                <  8:291708/149‑1 (MQ=255)                                                                                      cgcCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATgg                                                                <  8:288028/147‑1 (MQ=255)                                                                                      cgcCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATgg                                                                <  2:196874/147‑1 (MQ=255)                                                                                        ccAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGAGTGGAGAAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATgg                                                                >  1:115994/1‑148 (MQ=255)                                                                                         cAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAgg                                                                                      >  1:355034/1‑122 (MQ=255)                                                                                         cAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAgg                                                                                      <  2:355034/122‑1 (MQ=255)                                                                                           agcagcGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAggcgcagcagtgttcggcgccttcctcgcgctgctggtgggcgcactggcgatccgtcgcacgggcatctacttcgtcatgctgaccctggcc                                                              >  2:330110‑M2/1‑56 (MQ=255)                                                                                              agcGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAggcgcagcagtgttcggcgccttcctcgcgctgctggtgggcgcactggcgatccgtcgcacgggcatctacttcgtcatgctgaccctggcctt                                                            <  4:124126‑M2/148‑96 (MQ=255)                                                                                                       aaCATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGt                                             <  1:278356/149‑1 (MQ=255)                                                                                                              cccACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAgg                                      <  2:349114/149‑1 (MQ=255)                                                                                                                   tGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGc                                 >  6:355902/1‑149 (MQ=255)                                                                                                                     cAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTg                                            <  6:302273/136‑1 (MQ=255)                                                                                                                     cAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTg                                            >  5:302273/1‑136 (MQ=255)                                                                                                                     cAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGcc                                >  1:67697/1‑148 (MQ=255)                                                                                                                     cAGGGGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGc                                 <  5:231555/147‑1 (MQ=255)                                                                                                                        gTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCa                                                                            >  3:133704/1‑101 (MQ=255)                                                                                                                        gTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCa                                                                            <  4:133704/101‑1 (MQ=255)                                                                                                                            atcatcAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGgcag                        <  2:67697/149‑1 (MQ=255)                                                                                                                             tcatcaGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGgcagc                       <  6:155663/149‑1 (MQ=255)                                                                                                                               atcaGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCaa                     >  6:201014/1‑149 (MQ=255)                                                                                                                                   gcagcGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGc                 >  8:37108/1‑149 (MQ=255)                                                                                                                                    cagcGCTGCGCCATAGGCGCCCACGCGCAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGc                 >  1:187401/1‑149 (MQ=255)                                                                                                                                    cagcGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCTGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCg                >  8:211384/1‑149 (MQ=255)                                                                                                                                      gcgcTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGACCGGGGGGGCCGGGCAGCAGGAGGCAGGCCAGGGGGGCCATGGCAACGAGCACGAGCGCGGGGGCCCGGGGGGCGGCGGGCCGCAACACCGGc              >  2:324136/1‑149 (MQ=255)                                                                                                                                       cgcTGCGCCATAggcgcagcagtgttcggcgccttcctcgcgctgctggtgggcgcactggcgatccgtcgcacgggcatctacttcgtcatgctgaccctggccttcagccagatggcctacttcctggcctataccctcagcggctg                  >  3:124126‑M2/1‑12 (MQ=255)                                                                                                                                         cTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAgc           >  5:12418/1‑149 (MQ=255)                                                                                                                                         cTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAgc           <  6:253846/149‑1 (MQ=255)                                                                                                                                           gcgcCATCGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGCTCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAgcgc         <  3:211486/149‑1 (MQ=255)                                                                                                                                            cgcCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAgcgc         >  3:195390/1‑148 (MQ=255)                                                                                                                                            cgcCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAGCGcc        <  7:25999/149‑1 (MQ=255)                                                                                                                                               cATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCaa                     >  2:173491/1‑133 (MQ=255)                                                                                                                                               cATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCaa                     <  1:173491/133‑1 (MQ=255)                                                                                                                                               cATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAGCGccac      >  7:77897/1‑148 (MQ=255)                                                                                                                                                  aGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTg                                   <  2:9389/116‑1 (MQ=255)                                                                                                                                                  aGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAGCGCCACCAgg  >  6:292920/1‑149 (MQ=255)                                                                                                                                                  |                                                                                                                                                          AGGGTCAGCATGACGAAGTAGATGCCCGTGCGACGGATCGCCAGTGCGCCCACCAGCAGCGCGAGGAAGGCGCCGAACACTGCTGCGCCAAGCAGCGCGGCGAACATGCCCCACTGCAGGTGGATCATCAGCAGCGCTGCGCCATAGGCGCCCACGC‑CAAAGAAGATGCCCTGG‑CCGAACGA‑‑‑CAGCAGTCCGGTGTAGCCGAGCAGCAGGTTGCAGGCCAGTGCGGCCATGGCAAAGATCAGGATCTCGGTGGCCAGGGTGGCCGAGGGCAGCAACAGCGGCAGCGCCACCAGG  >  NC_002947/723404‑723697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.