New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 914212 | 41 (0.730) | 4 (0.070) | 4/246 | NT | 8.8% | coding (923/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
? | NC_002947 | = 914238 | 44 (0.820) | coding (949/1743 nt) | fruA | PTS fructose transporter subunit IIBC |
TCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATCCTTATCATT > NC_002947/914095‑914384 | tCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGGTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGAtcggc < 8:259899‑M2/149‑6 (MQ=255) tCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGAtcggc < 1:251256‑M2/149‑6 (MQ=255) aGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCggcggc < 6:367649/149‑1 (MQ=255) gCCTACAAAGAGGCGGGCACCTTGTCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCt > 8:242365/1‑149 (MQ=255) tACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGtt > 8:338426/1‑149 (MQ=255) cAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTgg > 2:83776/1‑149 (MQ=255) aaaGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTCGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGc > 6:246630/1‑149 (MQ=255) gCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑‑GGtcggcgatagaccaggcga < 8:184361‑M2/146‑20 (MQ=255) gCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGATCATGCCCGGGGCCAGCCCGGGGC‑‑‑GGtcggcgatagaccaggcga > 7:184361‑M2/1‑127 (MQ=255) gCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGtt > 1:147086/1‑129 (MQ=255) gCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGtt < 2:147086/129‑1 (MQ=255) ggcgTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCt > 6:349136/1‑120 (MQ=255) ggcgTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCa > 7:123338/1‑149 (MQ=255) aTGGAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGGTCCGCTACTGGCAGGCTATATCGCCTTGTCTATCGCCGACC‑‑GCCCCGGGGTGGCCCCGGGCATTGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGt < 1:80057/148‑1 (MQ=255) aTGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTCTCGCCGACC‑‑GCCCCGGGCGGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTg < 8:61999/148‑1 (MQ=255) aTGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTg < 7:338426/148‑1 (MQ=255) gATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTg < 8:123338/149‑1 (MQ=255) gCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGcc > 6:34227/1‑149 (MQ=255) aCTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTg > 2:68474/1‑85 (MQ=255) aCTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTa > 7:119870/1‑147 (MQ=255) cTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTTGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAg < 5:246630/149‑1 (MQ=255) tGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTg < 1:330864/83‑1 (MQ=255) tGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTg > 2:330864/1‑83 (MQ=255) aTGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAgc < 3:187989/147‑1 (MQ=255) gCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGc < 1:261232/78‑1 (MQ=255) gCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGc > 2:261232/1‑78 (MQ=255) gCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCa > 5:192638/1‑149 (MQ=255) cTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAgg > 3:170124/1‑145 (MQ=255) cTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAgg < 4:170124/145‑1 (MQ=255) gCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGccc > 5:203802/1‑148 (MQ=255) aGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGAt > 3:211680/1‑149 (MQ=255) ggCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATg < 3:199488/149‑1 (MQ=255) cTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCa > 7:245648/1‑89 (MQ=255) cTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCa < 8:245648/89‑1 (MQ=255) tatCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGgc < 5:34227/147‑1 (MQ=255) gCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGCTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCtt < 7:259899/149‑1 (MQ=255) ggTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGACAGCACCTTGGGGGCCGGCTTCATCGGTTGCATTGTCGCCCGTTTCCTCGCCGGTTACATCGCCAAGGCCATTTCACGATGGGCGCGCTTGcc > 6:31114/1‑148 (MQ=255) gTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGAtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgcatcaacgccgccggcaaggtgcccgcctctttgtag < 4:37643‑M2/149‑112 (MQ=255) cTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCcag > 3:288740/1‑148 (MQ=255) tATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGTCA‑TGATCGTCGGCCTGTTGGCCAGAACCTTGTGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCAAAGGCCATTGCCCGATGGTCGACATTGCCcag > 8:151927/1‑147 (MQ=255) gCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGAtcggcgatagaccaggcgatatagcctgccagtagcggaaccatcagtttgaaggcagcctcaccgccaatctgcatcaacgccgccggcaaggtgcccgcctctttgtaggcctcga > 3:37643‑M2/1‑31 (MQ=255) gCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTCTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCt < 5:313220/149‑1 (MQ=255) gACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGa < 1:83776/149‑1 (MQ=255) aCC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAg < 8:147836/149‑1 (MQ=255) aCC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAACACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAg < 2:251256/149‑1 (MQ=255) catgCCCGGGGCCAGCCCGGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAg > 8:268051/4‑149 (MQ=255) c‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGgc > 3:203206/1‑149 (MQ=255) gCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGgcg < 7:242365/149‑1 (MQ=255) ccccGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCGGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTg > 5:307716/1‑130 (MQ=255) ccccGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTg < 6:307716/130‑1 (MQ=255) ccccGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGgcgc < 6:203802/149‑1 (MQ=255) ccccGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTACCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGAt < 7:197025/119‑1 (MQ=255) ccccGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTACCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGAt > 8:197025/1‑119 (MQ=255) gCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGc < 6:192638/149‑1 (MQ=255) ccccGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATc > 6:198655/1‑149 (MQ=255) ccccGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATc < 8:119367/149‑1 (MQ=255) tGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATCCTTATCAtt > 4:342867/1‑149 (MQ=255) | TCGAGGCCTACAAAGAGGCGGGCACCTTGCCGGCGGCGTTGATGCAGATTGGCGGTGAGGCTGCCTTCAAACTGATGGTTCCGCTACTGGCAGGCTATATCGCCTGGTCTATCGCCGACC‑‑GCCCCGGGCTGGCCCCGGGCA‑TGATCGGCGGCCTGTTGGCCAGCACCTTGGGGGCCGGCTTCATCGGTGGCATTGTCGCCGGTTTCCTCGCCGGTTACAGCGCCAAGGCCATTGCCCGATGGGCGCGCTTGCCCAGCAGCCTGGAGGCGCTCAAGCCGATCCTTATCATT > NC_002947/914095‑914384 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |